Gene A2cp1_0525 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA2cp1_0525 
Symbol 
ID7296804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter dehalogenans 2CP-1 
KingdomBacteria 
Replicon accessionNC_011891 
Strand- 
Start bp604417 
End bp604836 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content69% 
IMG OID643593319 
Productnickel responsive regulator 
Protein accessionYP_002490948 
Protein GI220915644 
COG category[K] Transcription 
COG ID[COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain 
TIGRFAM ID[TIGR02793] nickel-responsive transcriptional regulator NikR 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.317174 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGAGC GCATCGGGAT CTCGCTCGAG GACGGGCTGC TCGAGCAGTT CGACAAGCTC 
ATCGCCGAGA AGGGCTACGT CAACCGCTCG GAGGCGATCC GCGATCTCAT CCGCGACGCG 
CTGGTGCAGC GCGCGTTCAC CGAGTCCTCG GGGCGCGAGG AGCGCGTGGC GGTGGTGACG 
CTGGTCTACG ACCACGACTC GTCCAGCCTG GCGCAGAAGC TCGCGCACAT CCAGCACGAG 
AACCACCGGG CGGTGGTCTC GGCCCTGCAC GTCCACATGG ACCCGCACAA CTGCCTCGAG 
GTGCTGGTGC TCCGCGGGCG GGGCAAGGAC GTGGTCGCGA TGGGCGAGAG CCTGGTCGCG 
ACCAGGGGCG TGAAGTACGG CAAGCTCGTG CCGGCCACCG CCGGGCACGA CCTCGGCTGA
 
Protein sequence
MLERIGISLE DGLLEQFDKL IAEKGYVNRS EAIRDLIRDA LVQRAFTESS GREERVAVVT 
LVYDHDSSSL AQKLAHIQHE NHRAVVSALH VHMDPHNCLE VLVLRGRGKD VVAMGESLVA 
TRGVKYGKLV PATAGHDLG