| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_0485 |
|---|
| Symbol | |
|---|
| ID | 7300369 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | + |
|---|
| Start bp | 555416 |
|---|
| End bp | 557146 |
|---|
| Gene Length | 1731 bp |
|---|
| Protein Length | 576 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 79% |
|---|
| IMG OID | 643593279 |
|---|
| Product | phosphonate ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_002490908 |
|---|
| Protein GI | 220915604 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3639] ABC-type phosphate/phosphonate transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01097] phosphonate ABC transporter, permease protein PhnE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCCAGG CCGCCTTGCA CGAGCGCCCG CCGCTCCCGC TCCTGCTCCG CTGGCCGGGC
CTCGTGCTCG CCGCCGTGCT GGGGATCGCC TGGCGCATGT CGGAGGGGAG CCTCGGGGCC
CTGCTCGCGC CCGAGGCCCG GTCGGCCGCG GCGGAGTTCG CGCGCGGCTT CTGGCCGCCG
GCGCACTCGC CTGCGTTCCT CCGCTTCCTG GCCCGGCCGC TCGCCGAGAC CGTCGCCATC
GCGTTCGCCG GCATGACGCT CGCGCTCGTG CTCGCCGCGC CGCTCGCGTA CCTCGCGACC
GCGCCGGACG TCGGCCGGGT CCGGGGCGAC GCGCCGGGGC CGCTGCGCCG AGCGGCGTGG
ATCGGTGCGC GCACGGTGCT CAACCTGATG CGCTCCGTCC CGGAGCTGGT CTGGGCGCTC
GTGTTCGTGC GCGCGCTCGG GCTCGGGCCG GCCGCAGGGG TGGCGGCCAT CGGGATCGGG
TACGCGGGCG TGGTCGGGAA GGTGTTCGCC GAGATCTGGG AATCCTCGCC CTGCGCGCCG
GCCCGCGCGC TCGCCGCCGC CGGGGCGCCG CCGCGCCGCG CCTTCGCGCT GGCGGTGCTG
CCCGGGTCGG CGCCGCTGCT CGCCTCCTAC GCGCTCTACC GGCTCGACTG CGCGCTCCGG
GCCTCGGCGG TGCTGGGGCT GGTGGGGGCG GGCGGGATGG GCGTGCAGCT CGAGCTGTCG
CTCAAGATGT TCGCGTACGA CGAGGTGGCG ACGCTGGTGC TGGCGCTGTT CGCGGTGGTG
GCCGCGGTGG ACCTCCTCTC CGCCTGGGCC CGCCGGCGCC TCGCGGAGAG CCGCGGGCTC
TATCCGGCCG GCCCGGGCGC GCTCCGCTGG CGCGCGGCGA TCCTGGGCAC CTGGCTCGCG
CTCGCCGCCG GCGCGGCCGC GTACCTCGAG CTGCCGCTCG GCGAGCTGTT CTCCGGGGCC
ACGCTGCGGA GCGCGGCAGC CTTCTTCGGC TCGATGTTCC CGCCCGACCT CTCGCCCGGC
TTCCTGCGCG GGCTCGCCCC CGCCGTGGCC GAGACGCTGG CGGTGAGCGT GCTCGGGAGC
GCCCTCGCGT CGGTCCTCGG GCTCGGCCTC GCGCTGGCCG CGGTCCACCC CGGCGCGCGC
GGCCTGGCCG GCGCGCCGGG CGACTCGCGC CTGCGGGCCG GGGCGCGGCT CGCGGTCACG
GCGGGCGCCC GCGGCGCCAT GAACCTGCTC CGGACGCTGC CGGAGCTGCT GTGGGCGCTC
GTCGCGATCT TCGCGGTGGG CCTGGGCCCG TTCGCGGGCG CGCTCGCGCT CGGCATCCAC
AACGCCGGCG TGCTCGGGCG GCTCTACGCC GAGGCGCTCG AGGAGGTGCC GCCCGGCCCG
GTGGCGGCGC TCCGCGGCGC CGGGGCGCGC CCGCTCGCGG CGACGCTGCT CGGCGCGCTG
CCGCAGGCCT GGCCGCAGCT CGTCGCGTAC ACGCTCTACC GGTGGGAGGT GGCGGTCCGC
GCCTCGGCGG TGCTCGGCGT GGTGGGGGCG GGCGGCATCG GCGCGCTCCT GCACGTCTCG
CTCAACCTGT TCCAGCACCA CCGCACGCTC ACGCTGGTCG CCGCCATCGT GCTGCTCGTC
ACCGCGGTGG ACCTGTTCTC CGGCTGGCTC CGGGCCCGCA TCCTGGCGGG CCCCGCGAGC
CGCGCCGCGC CGCGCGCCGG CTGCGCGCCC GGGCTCGCGA ATGCGACTTG A
|
|---|
| Protein sequence | MSQAALHERP PLPLLLRWPG LVLAAVLGIA WRMSEGSLGA LLAPEARSAA AEFARGFWPP
AHSPAFLRFL ARPLAETVAI AFAGMTLALV LAAPLAYLAT APDVGRVRGD APGPLRRAAW
IGARTVLNLM RSVPELVWAL VFVRALGLGP AAGVAAIGIG YAGVVGKVFA EIWESSPCAP
ARALAAAGAP PRRAFALAVL PGSAPLLASY ALYRLDCALR ASAVLGLVGA GGMGVQLELS
LKMFAYDEVA TLVLALFAVV AAVDLLSAWA RRRLAESRGL YPAGPGALRW RAAILGTWLA
LAAGAAAYLE LPLGELFSGA TLRSAAAFFG SMFPPDLSPG FLRGLAPAVA ETLAVSVLGS
ALASVLGLGL ALAAVHPGAR GLAGAPGDSR LRAGARLAVT AGARGAMNLL RTLPELLWAL
VAIFAVGLGP FAGALALGIH NAGVLGRLYA EALEEVPPGP VAALRGAGAR PLAATLLGAL
PQAWPQLVAY TLYRWEVAVR ASAVLGVVGA GGIGALLHVS LNLFQHHRTL TLVAAIVLLV
TAVDLFSGWL RARILAGPAS RAAPRAGCAP GLANAT
|
|---|
| |