| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_0400 |
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| Symbol | |
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| ID | 7299283 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011891 |
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| Strand | - |
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| Start bp | 449550 |
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| End bp | 451430 |
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| Gene Length | 1881 bp |
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| Protein Length | 626 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 643593194 |
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| Product | Radical SAM domain protein |
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| Protein accession | YP_002490823 |
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| Protein GI | 220915519 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes
[COG1427] Predicted periplasmic solute-binding protein |
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| TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.184942 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGAAGA AGATCCGCGC CGCCGCCGTC TCGTTCCTGA ACGCCTGGCC GCTCACCGCC
GGGCTGGAGG GCTCCGAGCG CATCGAGCTG GTGCTGGCCG AGCCGTCCCG CTGCGCGGCC
ATGCTGGAGG CGGGCGAGGT GGACCTGGCG CTCGTGTCGG TCGCCGCGCT CACCAAGGGC
CAGTACGACA TCGTGCCCGG CATCGCCATC GGCGCCGACG GCCCGGTGCA GACGGTGGTG
CTCGCCGGCG AGCAGTCGCC GGCCATCTGG GACGAGGTGT TCCTCGACAC CGCCTCCCGC
ACCTCGCACG TGCTCGCGAA GCTGGTGCTC GACGCCATGG GCGTGCACCC GAAGTTCACC
CCCATGCACG CGGACGAGGG ACTGGCCCGC GCCAGGGGCA CCAAGGGCGC GCTCGTGATC
GGCGACCGCG GGTTCGGCGT CCGCGCCAAC CACGTGCTCG ACCTCGGGCG CGAGTGGACC
CGGCTCATCG GGCTCCCCAT GATCTTCGCG CTGTGGGCGG CGCGGCCGGG CGCGGTCACC
CCCGAGGACG TGCAGGAGCT GACCCGGGCT GCGCAGCACG GCCTCGGGAT CCGCACCGAG
CTGGCGCAGA AGTTCGCCGC GCAGAAGGGC GGCGACCCGG AGAAGTACCG CCGCTACCTC
ACCCAGAAGA TCCGCTACGG CCTCGGCCCC TACGAGCTGC AGGGGCTGGA GGCGTTCCTG
GAGCGCGCCG CCGCGAAGGG CTTCCTGCCC CCCATGCCGC TCCGCTTCGT GGACGACGTG
GTGCGGACCC GGCGCGTGCG CCGCGCCGTC TCGGTGGACA CCGCGCTGCA GAAGGGCGCG
GACGGCGAGC GGCTCGACGC CGACGAGGCG GCCACGCTCG ACGAGAAGGC GCCGCTGCTC
GAGCTCGGGC TGGCGGCCGA CCAGCGCCGC CGCGCGCTCC ACCCCGGCGA CCTCGTCACC
TACATCGTGT CGCGGAACGT GAACTACACG AACGTGTGCA CCACCGCGTG CCACTTCTGC
GCGTTCTACC GCCCCCGCGG CCACCAGGAG TCGTACGTCC TCACGCGCGA GGAGCTGACG
CAGAAGATCG ACGAGACCGT GGCGCTCGGC GGCATCGAGA TCCTGCTGCA GGGCGGCCTC
CACCCCGACC TCGGCGTCGA GTGGTACGAG GACCTGTTCC GCTGGGTGAA GCAGACCTGG
CCGGTGATCA ACCTCCACGC GCTCTCCCCC GAGGAGATCT GGCACATCGC CCGGACGAGC
GAGCTCGGGC TCGAGGCCAC CATCGACCGG CTGGTCGCGG CCGGGATGGA CTCGATCCCG
GGCGGCGGCG CCGAGATCCT GGACGACGAG GTCCGCCGCC GGATCGCGCC GCTCAAGTGC
TCCACCGACG AGTGGCTCAC CGTGATGAAG GCGGCCCACC TGAAGGGGCT GAAGAGCACC
GCCACCATGA TGTTCGGGGT GGGCGAGGGG CCGGAGCACC GGGTGGCGCA CCTCATGCGG
CTGCGCGAGC TGCAGGACGA GACGCACGGC TTCACCGCGT TCATCTGCTG GCCGTTCCAG
TCGCAGAACA CCCGGCTCGA GCCGGGCGAC GGCAGCGCCC ACGCCTACCT GCGCACGAAC
GCGCTCTCGC GCCTGGTGCT CGACAACGTC CCGAACCTGC AGGCGTCGTG GGTGACGATG
GGCGGGGGCG TGGCCCAGGC CGCGCTGCAC ATGGGCTGCA ACGACTTCGG CCAGGTGATG
ATCGAGGAGA ACGTGGTCTC CGCGGCCGGC ACCACCTTCA AGATGGACTC GGAGGAGGTG
GAGCGGCACA TCCGCGACGC CGGCTTCCGC GCCGCCCGCC GCAACATGAA GTACCAGCTG
GTGGAGGAGA CCCGCGCGTG A
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| Protein sequence | MPKKIRAAAV SFLNAWPLTA GLEGSERIEL VLAEPSRCAA MLEAGEVDLA LVSVAALTKG
QYDIVPGIAI GADGPVQTVV LAGEQSPAIW DEVFLDTASR TSHVLAKLVL DAMGVHPKFT
PMHADEGLAR ARGTKGALVI GDRGFGVRAN HVLDLGREWT RLIGLPMIFA LWAARPGAVT
PEDVQELTRA AQHGLGIRTE LAQKFAAQKG GDPEKYRRYL TQKIRYGLGP YELQGLEAFL
ERAAAKGFLP PMPLRFVDDV VRTRRVRRAV SVDTALQKGA DGERLDADEA ATLDEKAPLL
ELGLAADQRR RALHPGDLVT YIVSRNVNYT NVCTTACHFC AFYRPRGHQE SYVLTREELT
QKIDETVALG GIEILLQGGL HPDLGVEWYE DLFRWVKQTW PVINLHALSP EEIWHIARTS
ELGLEATIDR LVAAGMDSIP GGGAEILDDE VRRRIAPLKC STDEWLTVMK AAHLKGLKST
ATMMFGVGEG PEHRVAHLMR LRELQDETHG FTAFICWPFQ SQNTRLEPGD GSAHAYLRTN
ALSRLVLDNV PNLQASWVTM GGGVAQAALH MGCNDFGQVM IEENVVSAAG TTFKMDSEEV
ERHIRDAGFR AARRNMKYQL VEETRA
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