Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | A2cp1_0387 |
Symbol | |
ID | 7296491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
Kingdom | Bacteria |
Replicon accession | NC_011891 |
Strand | - |
Start bp | 433458 |
End bp | 435416 |
Gene Length | 1959 bp |
Protein Length | 652 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 643593181 |
Product | proprionate catabolism activator, Fis family |
Protein accession | YP_002490810 |
Protein GI | 220915506 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR02329] propionate catabolism operon regulatory protein PrpR |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCCCCG CCGACCGCCG CCCCATCGTC TGGGCGTTCA GCACGAGCCG ACTCCGGCAC GTGTTCGAGA GCGTCGCGCC CTTGATGGCG GACGTGGCCG AGGTCCGGGT CTTCGACAAG GGGTTCGAGG AGGCGCTCCA GGTCGCGCGC GAGCTCCGGC AGGCCGGCGA GGAGGTGGAC GCGTTCGTGG CGGCCGGCAC CAACGGCGCC TACCTGCGCG ACCACGCGGA CGTGCCGGTG GTGGTGGTGA CCGCCTCGAC CGTGGACGCG CTCCAGGCGC TGGTGCAGGC GCGCAAGCTC TCGAAGCGCA TCGGCGTGGT GAACTTCCGG CGCACGGTGG CGGGCCTCGA GGGCGTGCAC CTCATCGACG ACACCGTCAT CGAGCAGCGG CCCTACGTGA CGCCGGAGGA AGGGCAGGCC GCGGTGGACG ACCTCTCCGC GCGCGGCTTC AAGGTCATCG TCGGCCCGGG GCCCATCTGC TCGGTCGCGG AGCGCTCCGG CCTGCGCGCC GTGCTGCTGT ACGGCCAGGA CTCGCTGGAA GAGGCGATCC GCCAGGCCGC CGAGGTGGCG CGCATCGCGC GCGTCGAGGG CTCGCGGCGC ACACACCTCC AGGCGATGTT CCAGCACCTC GAGGTCGGGG TGGTGGCGGT GGACACCGAG GAGCGCATCC AGGCCATCAA CCCGGCGCTG CAGCGGCTGC TCGGCGTCAC CGCGGCCGAG GTGCAGGGGC GCAAGCTCTC CGCGGTCGCG CCCGAGCTGG CCATGGGCCC GGTGCTGGAG GGCGGCCCGC CGGAGGTCGA GGCGGTGCAG CGCATCGGCG TCGCCGCCGC GGTGGTGAGC CGGTTCCCGC TGCACGAGCA CGGCGTCCTG CGCGGCGCGG TGCTCACCTG CCAGCCCGCC GCGATGGTCC AGCGGCTCGA GCGCGGGCTC CGCTCCACGC ACCGCCCGCC GCGGTTCGTG GCGCGGTACG CGCTCTCCGG CCTGGTGGGC GAGTCGCCGG CGATGGTCCG GCTGCGCGAG CTCGCCGGCC GCTACGCGCG CACCGACGCC ACCGTGCTCA TCACCGGCGA GAGCGGCACC GGCAAGGAGA TGGTGGCGCA GGGCATCCAC GGCGCGAGCC GCCGGCGCGA CCGGCCGTTC GTGGCGGTGA ACTGCGCCGC GTTCCCGGAG ACGCTGCTCG AGGCCGAGCT GTTCGGCTAC GAGGAGGGCG CGTTCACCGG CTCGCGGCGC GGCGGGCGCC CCGGCCTGTT CGAGGCGGCG CACACCGGCA CGCTGTTCCT CGACGAGATC GGCGACGTGC CGGTCACGCT GCAGACGCGG CTCCTGCGCG TCCTGCAGGA GCGGCAGGTG CTCCGGCTCG GCAGCAACGA TCCCACCCCG GTGGACGTGC GCGTCATCGC CGCGACGCAC CGCGACCTCC GGCAGGCCAT CGCGCGCGGC GAGTTCCGCG AGGACCTCTA CTACCGCCTC GACATCCTCC CGCTGCACCT GCCGCCGCTG CGCGAGCGGG GCGAGGCGGA CGTCGAGCTC ATCGCCTCCG ACCTGCTGAA GCGCGCCCTC CTCCGCCATG GCGCCGCCGA CGCGCACCGG CGCGCGCTCT CCATGGTGCT GCCGCGGCTG CGCGGACACG CCTGGCCCGG GAACGTGCGC GAGCTCGAGA ACGTGCTCGA GCGCGTGGCG GTGCTGTTCG CGGACCGCGA CCCGCGCGCG CGCGTGACCG AGGAGGAGCT CGCCGCGGTG ATGCCGGAGG TCGCGGATCC GACCGCCCGC GCCGCCGCGC CCACCGCTCC CTCCGCGGTC GCCCCGCCCA TCGACCTCCG CCTCGCCCGC GCCGCCCAGG AGCGGGTCCT CATCGAGCGG ACCGTGGCCG AGTGCGGCGG CAACCAGGCC GAGGCCGCCC GCCGGCTCGG CATCGGGCGG ACCACGCTGT ACCGGAAGCT CGGGAGGGTC AGGGCGTAG
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Protein sequence | MTPADRRPIV WAFSTSRLRH VFESVAPLMA DVAEVRVFDK GFEEALQVAR ELRQAGEEVD AFVAAGTNGA YLRDHADVPV VVVTASTVDA LQALVQARKL SKRIGVVNFR RTVAGLEGVH LIDDTVIEQR PYVTPEEGQA AVDDLSARGF KVIVGPGPIC SVAERSGLRA VLLYGQDSLE EAIRQAAEVA RIARVEGSRR THLQAMFQHL EVGVVAVDTE ERIQAINPAL QRLLGVTAAE VQGRKLSAVA PELAMGPVLE GGPPEVEAVQ RIGVAAAVVS RFPLHEHGVL RGAVLTCQPA AMVQRLERGL RSTHRPPRFV ARYALSGLVG ESPAMVRLRE LAGRYARTDA TVLITGESGT GKEMVAQGIH GASRRRDRPF VAVNCAAFPE TLLEAELFGY EEGAFTGSRR GGRPGLFEAA HTGTLFLDEI GDVPVTLQTR LLRVLQERQV LRLGSNDPTP VDVRVIAATH RDLRQAIARG EFREDLYYRL DILPLHLPPL RERGEADVEL IASDLLKRAL LRHGAADAHR RALSMVLPRL RGHAWPGNVR ELENVLERVA VLFADRDPRA RVTEEELAAV MPEVADPTAR AAAPTAPSAV APPIDLRLAR AAQERVLIER TVAECGGNQA EAARRLGIGR TTLYRKLGRV RA
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