Gene A2cp1_0385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA2cp1_0385 
Symbol 
ID7296488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter dehalogenans 2CP-1 
KingdomBacteria 
Replicon accessionNC_011891 
Strand
Start bp430887 
End bp432503 
Gene Length1617 bp 
Protein Length538 aa 
Translation table11 
GC content64% 
IMG OID643593178 
Productputative transcriptional regulator 
Protein accessionYP_002490808 
Protein GI220915504 
COG category[K] Transcription 
COG ID[COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCAAA GAGGACTCGA GGAGCTGCGG ATCTGGATGA ACTCGGTCGA AGCCGAGCGC 
CTCGAATTCA AGGAGGCGAA GAACAATTTC GACCTAGAAA AGCTCGTCCA GTACTGCGTC
GCCATCGCGA ACGAGGGCGG GGGCGTGCTC ATTCTGGGGG TCACAGACCA GGCTCCCCGC
CGCGTCGTGG GCAGCCGGGC GTTCGAGGAT CTCGAGAGGA CGAAGTCTCA GTTGGTCGAC
CGTCTGAAGC TCCGCGTTGA TGCCGACGTG ATCGCGCACC CCGACGGCAG GGTTGTCGCG
TTCACGATTC CGCCCCGCCC TCTCGGCGTC CCGCTTCACC ACAACGGCGC GTATCTGATG
AGGGCGGGCG AGTCGCTCGT CGCGATGACG CCTGACAGGT TGCGACGCAT CTTCGACGAG
GTTGTGCCCG ATCACTCGGC GGAGATCGTT CCCGCCGCTA CGATGGCCGA TCTCGAGCCC
GGAGCCATCG AGAAGTTCCG AGAGCTGTGG CGACGGAAGT CAGGTAACGA GCAGATCGAC
CGAATGGGGC CGGATCAACT CCTGGCGGAC GCCGAGCTGG CGCCCGACGG CCGCATCAGT
GTTGCGGCGC TCGTGCTGCT CGGCACTCGC GCTGGGCTCG GAAGACATCT AGCGCAGGCC
GAGCTGGTGG CTGAGTACCG GTCCGCGGAC GCGAGCATCG CGCCACAGCA GCGTCTCGAA
TTCCGCGAAG GGTTCCTGCG CTACTTCGAC GAGCTGCTTC GGTTTGTCCA AGCGCGCAAC
GAGGTGCAGC AGTTCCGCGA CGGCCTCATC ATCAGGGACA TTCCCACCAT CAACGAGGTC
GCCGCACGCG AGGCGATCCT GAATGCGGTG AGCCACCGCG ATTACAGGCA CGCTGGATCG
ATCTTCCTGC GCCTGTACCC TCGACGGATC GAGATCGTGA GCCCCGGCGG GTTCCCTCCA
GGCGTGACGG CGGAGAACAT CTTGTGGCGG CAAGCGCCGC GGAACCGACG GCTCGCGGAG
GCGCTCGCGA AGTGCGGGTT CGTCGAGCGC TCCGGCCAGG GCGCCGACAG GATGTTCGAG
GAGTCCATCA AGGAGGGTAA GCCCCGTCCC GACTTTGCCG GGACGGACGA CTATCAGGTC
GCGCTCACGT TGCGTGGCGA CGTGCAAGAC GTCGCCTTCC TCCGTTTCCT AGAGCGCGTC
GGTCAGGAAA CCCTTGTCTC ATTCTCGACG ACCGACCTCG TCGTCCTCGA TATCGTTCAT
CGCGGCGAGG AGGTCCCGAA GAACCTCGCG TCTCGTGTGC CTCAACTGGT CGAGAAGGGT
GTCCTTGAGC GCTACGGCCG AGGGCGGAAG AAGCTCATGC TTTCGCGCCG CTTCTACGCG
TTCGTCGGCC GCAAGGGGGA GTACACGCGC CGGCGCGGCC TCGACAAGCC GCATTCGAAA
ATGCTGCTGC TCCAGCACCT AGAGCAGTTC GAGACGGCGA CCATCCAGGA GTTCGAGCAG
GCGCTCCCTG GCCACGTCCG TCACGCCATT CACCGGCTGC TCCGAGAGTT GAAGAGGGAA
GGAAAGGTCG TGATGCTCGG GTCCAAGCGT GGAAGCCGCT GGACCCTGAA GAAGTGA
 
Protein sequence
MKQRGLEELR IWMNSVEAER LEFKEAKNNF DLEKLVQYCV AIANEGGGVL ILGVTDQAPR 
RVVGSRAFED LERTKSQLVD RLKLRVDADV IAHPDGRVVA FTIPPRPLGV PLHHNGAYLM
RAGESLVAMT PDRLRRIFDE VVPDHSAEIV PAATMADLEP GAIEKFRELW RRKSGNEQID
RMGPDQLLAD AELAPDGRIS VAALVLLGTR AGLGRHLAQA ELVAEYRSAD ASIAPQQRLE
FREGFLRYFD ELLRFVQARN EVQQFRDGLI IRDIPTINEV AAREAILNAV SHRDYRHAGS
IFLRLYPRRI EIVSPGGFPP GVTAENILWR QAPRNRRLAE ALAKCGFVER SGQGADRMFE
ESIKEGKPRP DFAGTDDYQV ALTLRGDVQD VAFLRFLERV GQETLVSFST TDLVVLDIVH
RGEEVPKNLA SRVPQLVEKG VLERYGRGRK KLMLSRRFYA FVGRKGEYTR RRGLDKPHSK
MLLLQHLEQF ETATIQEFEQ ALPGHVRHAI HRLLRELKRE GKVVMLGSKR GSRWTLKK