Gene A2cp1_0288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA2cp1_0288 
Symbol 
ID7298990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter dehalogenans 2CP-1 
KingdomBacteria 
Replicon accessionNC_011891 
Strand
Start bp322069 
End bp322515 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content67% 
IMG OID643593083 
ProductBiopolymer transport protein ExbD/TolR 
Protein accessionYP_002490713 
Protein GI220915409 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.148779 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGATGG GGCTCGGGTC CAAGCGACCC GTCACCGACA TCAACGTCAC GCCACTCATC 
GACGTGGTGC TCGTGCTCCT GATCATCTTC ATGGTGCTCA CGCCGCTCGC GGAGAAGCAG
AAGTTCATCC GCGTCCCGGA GTACCAGCCG GAGATGCAGC CGGTCCCGCC CGACTCGGTG
CCGCCGGACC AGACGGTCCT CACCGCGCTC GGCAACGGCA ACGTCCTCCT GAACAAGCAG
GAGATGACGA TCAACGACGC GATGCAGCGG CTGCACGTCG CCTACGACGG GCGCCCGTCG
AAGGTGATGT TCTTCAACGC CGAGGACTCC GTCCGCTACG AGCAGGCCGT CAAGGTGCTC
GACGCCGCCC ACGGGGCGGG CGTGAACACC ATCGGGATGA TGACCGATCC GCCGCTCGGC
GGCGGCGCGG CGGGCGAGCA GCAGTAG
 
Protein sequence
MAMGLGSKRP VTDINVTPLI DVVLVLLIIF MVLTPLAEKQ KFIRVPEYQP EMQPVPPDSV 
PPDQTVLTAL GNGNVLLNKQ EMTINDAMQR LHVAYDGRPS KVMFFNAEDS VRYEQAVKVL
DAAHGAGVNT IGMMTDPPLG GGAAGEQQ