| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_0258 |
|---|
| Symbol | |
|---|
| ID | 7298960 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | + |
|---|
| Start bp | 281076 |
|---|
| End bp | 281762 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 83% |
|---|
| IMG OID | 643593053 |
|---|
| Product | phosphoribosyltransferase |
|---|
| Protein accession | YP_002490683 |
|---|
| Protein GI | 220915379 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1040] Predicted amidophosphoribosyltransferases |
|---|
| TIGRFAM ID | [TIGR00201] comF family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCCGCG CCGCCGTCCG CGCCCTGCTC GACCTCGTCT ACCCGCCCCG CTGCGCCGCC
TGCGGCGAGC CGGTGGCCGA GGAGCCGTTC TGCGAGGTGT GCGCCGGCGC GCTCGAGCCG
GTCCCGCCGG GCTGCGACCG CTGCGGCGCG CCCGGGCCGG GGCCGGCCTG CGGCGCGTGC
CTGGCCGCCC CGCCCGCGTT CGACGTGGTC CGGGCAGGCG GGCTGTTCGG AGGGCCGCTC
GCCGACGCGG TGCACGCGCT GAAGTACGGC GGCCGGCCGG ACCTCGCGCG GCCGCTGGGC
GCCTGGCTCG CGGCGCGCGT CCCGCTCCCG CCGGGCGCCG CGGTGGTGTC GGTCCCGCTC
GGCCGCGCCC GCCGCATCGC GCGTGGCTAC GACCAGGCGG CGCTGCTCGC CGACGCGCTG
GCGCGCGCCG CCGGCGCCCG GGGCCGCCGC CTGCGCGGGG TGCTCCGCCG CGCCCGCGAG
ACGGCGCCGC AGGTGGGCCT GGGCCGCGCC GAGCGCGCCC GCAACGTGGA GGGCGCGTTC
CTGGCCGGCC CGGCGGTGGC CGGCCGCGAC CTGGTGCTCG TGGACGACGT CGTCACCACC
GGCGCGACCG CCGACGCGGC GGCGCGCGCG CTCCGGGCGG CGGGCGCCCG GTCGGTCACG
GTGGTCGCGC TCGCCCGGGC CGAGTGA
|
|---|
| Protein sequence | MLRAAVRALL DLVYPPRCAA CGEPVAEEPF CEVCAGALEP VPPGCDRCGA PGPGPACGAC
LAAPPAFDVV RAGGLFGGPL ADAVHALKYG GRPDLARPLG AWLAARVPLP PGAAVVSVPL
GRARRIARGY DQAALLADAL ARAAGARGRR LRGVLRRARE TAPQVGLGRA ERARNVEGAF
LAGPAVAGRD LVLVDDVVTT GATADAAARA LRAAGARSVT VVALARAE
|
|---|
| |