| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_0218 |
|---|
| Symbol | |
|---|
| ID | 7298453 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | - |
|---|
| Start bp | 235290 |
|---|
| End bp | 236195 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 79% |
|---|
| IMG OID | 643593013 |
|---|
| Product | pseudouridine synthase, RluA family |
|---|
| Protein accession | YP_002490643 |
|---|
| Protein GI | 220915339 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
|---|
| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.805878 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGCCGCC TGACCCTGCT CGTGCCGGAC GCCGATCGGT ACGAGCGGAT CGACCGGTTC
ATCGCCGCGC GCGGCGGGAT CTCGCGCGGC CTGGCCCGGC GCGCCATCGA GGCGGGCGGC
GTGTTCGTGG ACGGGCGCCG CTGCAAGGTG GCGGGCCGCA CGCTCACCCC CGGCCAGCAG
GTGGTGGTGA ACCTCGAGGA GGGCGGCCGC GCCGCGCCGG CGCTGGCCGC GCTGGGCCGG
GAGCGGCTGC TCTACGCCGA CGCGGACCTG TGCGCGGTGG ACAAGCCCGC CGGCGTCCCG
GCGCAGCCGA CGCTGACGAC CGATCGCGGC GCCTTGCCCG AGCTGGTCTC GGCGCTGCTC
GGCGCGCCGG TGACGCTGGT GCACCGGCTC GACCGGGAGA CCTCCGGCGT GACGGTGTTC
GCGCGCACGC GCGACGCCGC CGCGGCGCTC GCCGAGGCGT TCCGCACCGG CACGCCGGAG
AAGACCTACC TCGCGCTCTG CGCCCGCGCG CCCTCGCCGG CGGAGGGCCG CGTCGCGCTC
GCGCTCGGCA AGGACCCGGC GCGCCCGGGC CTGCGCCGCG TCGATCCGGC CGGCGACCCG
GCCGCCACCC GCTATCGCAC CCTGCGTGAA GCGCCGGGCG GCGCGCTGGT GGAGGCGCGC
CCGGAGACCG GCCGCACCCA CCAGATCCGC GTGCACCTCG CCGCGCTCGG CGCGCCGCTG
CTCGGCGACG CGCGCTACGG CGGGCCGCGC CGGGTCGGGG AGGTGGCGGC GCCGCGGGTG
ATGCTGCACG CGACGCGGCT CGAGCTGCCG CATCCGGCCA CCGGCGCGCG GATGGTGTTC
GAGGCCGAGC CGCCCGAGGA CTTCCGCGCG GTCGAGGCTG CGCTCGTCGG CCCGCCGGAG
CGCTAG
|
|---|
| Protein sequence | MRRLTLLVPD ADRYERIDRF IAARGGISRG LARRAIEAGG VFVDGRRCKV AGRTLTPGQQ
VVVNLEEGGR AAPALAALGR ERLLYADADL CAVDKPAGVP AQPTLTTDRG ALPELVSALL
GAPVTLVHRL DRETSGVTVF ARTRDAAAAL AEAFRTGTPE KTYLALCARA PSPAEGRVAL
ALGKDPARPG LRRVDPAGDP AATRYRTLRE APGGALVEAR PETGRTHQIR VHLAALGAPL
LGDARYGGPR RVGEVAAPRV MLHATRLELP HPATGARMVF EAEPPEDFRA VEAALVGPPE
R
|
|---|
| |