| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | A2cp1_0095 |
|---|
| Symbol | |
|---|
| ID | 7299737 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anaeromyxobacter dehalogenans 2CP-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011891 |
|---|
| Strand | + |
|---|
| Start bp | 104609 |
|---|
| End bp | 105370 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 81% |
|---|
| IMG OID | 643592890 |
|---|
| Product | Phosphomethylpyrimidine kinase |
|---|
| Protein accession | YP_002490520 |
|---|
| Protein GI | 220915216 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase |
|---|
| TIGRFAM ID | [TIGR00097] phosphomethylpyrimidine kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000458496 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATCCCGC GGGTCCTGGT GGTGGCCGGC CTCGACCCGT CGGGCGGGGC GGGGCTGACC
GCCGATCTCG AGGCGCTCGC CGCCGTCGGG GCGCGCGGCT GGGCGGTCGC GACCGCCCTC
ACCGCCCAGG GCCCCCGCGG CGCGCGCGGC GTCTCGCCCG CGAGCGAGGC GTTCCTGCGG
CTCCAGATCG ACGCGCTGCT GGAGGGGCGG GAGCGGCCGC ACGCCGTGAA GACCGGCATG
CTCGGGACCG CGGGCCTGGC CCGGGCGCTG GCGGCGCGGC TCGCGGAGCC GCCGATCGCG
CGCGTGCCGC TGGTGGTCGA TCCGGTGCTG CTCGCGTCCT CCGGCGCGCC GCTCCTCGAC
CCGGGGGGCG TCCCGCCCGG CGAGGCGCTC GCGCCGCTGC TCGGCCGGGC GCGGCTCGTC
ACGCCGAACC TGCCCGAGCT CGCTGCGCTC ACCGGCGTCG AGGTCGCGGA CGACGAGGCG
GCGGTCCGGG CGGCGCGGAT GCTCCCGGCG CGCGCGGTGC TGGTGAAGGG CGGGCACCGC
GAGGGCGCGC CGGTGGACCT GCTGGTGGAG GGGCGGCGGC GCGTGACGCG GTTCACCGGG
CGGCGGCGGG CGGGGACGGC GCGCGGCACC GGCTGCCGGC TGGCGTCGGC GATCGCCGGG
CTGCTGGCGG GCGGCGCGTC GCTGGAGGAG GCGGTGCGCG GGGGGAAGCG GGTGGTGGAG
CGGTATCTGG ATGCTTGCGG TCGGGGGGCG GTCGGGCGTT GA
|
|---|
| Protein sequence | MIPRVLVVAG LDPSGGAGLT ADLEALAAVG ARGWAVATAL TAQGPRGARG VSPASEAFLR
LQIDALLEGR ERPHAVKTGM LGTAGLARAL AARLAEPPIA RVPLVVDPVL LASSGAPLLD
PGGVPPGEAL APLLGRARLV TPNLPELAAL TGVEVADDEA AVRAARMLPA RAVLVKGGHR
EGAPVDLLVE GRRRVTRFTG RRRAGTARGT GCRLASAIAG LLAGGASLEE AVRGGKRVVE
RYLDACGRGA VGR
|
|---|
| |