Gene A2cp1_0078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagA2cp1_0078 
Symbol 
ID7296720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnaeromyxobacter dehalogenans 2CP-1 
KingdomBacteria 
Replicon accessionNC_011891 
Strand
Start bp88504 
End bp89304 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content68% 
IMG OID643592873 
ProductSec-independent protein translocase, TatC subunit 
Protein accessionYP_002490503 
Protein GI220915199 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0805] Sec-independent protein secretion pathway component TatC 
TIGRFAM ID[TIGR00945] Twin arginine targeting (Tat) protein translocase TatC 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAA CCGTCCCGCA GCTGCCGCCG CCGCCGTCGC CCGAGCCCGA GGGCGAGGTG 
AAGCTGTCGT TCCTCGATCA CCTGCGCGAC CTGCGCGTCC GCATGGTGCG CGCGATGCTC
GGCATCGCGA TCGGGATGGG CCTGGTCGGC GGGTTCGTGC CGCAGATCGT GGACCACCTG
ATGAAGCCGG TGCGCGACGC GCTCCCGGCC GGCCGCCAGC AGCTCGTGTA CACGAGCGCG
ATCGAGCCGA TGATGGTCTA CATCAAGGTG GCCATGTACG GCGGCGTCTT CGTCGCGGCG
CCCTGGGTGC TGTGGCAGCT CTGGCTGTTC ATCGCGCCCG GCCTGTACAA GCGCGAGAAG
AAGGTGGTGT TCCCGTTCCT GTTCTGGGGG ACGCTGCTCT TCTACCTGGG CGCGCTGTTC
TGCTTCGAGC TGGTGATGCC GCAGGCGTTC CCGGCCATGC TGGCGTTCGC AGAGAGCGAC
ACGCTCTCGC CGATGCTCTC CCTCTCCGAG CAGCTCTCGC TCGTGCTCGC CATGCTGCTC
GGCTTCGGGG TGGTGTTCGA GGTCCCGGTG GTCATCGCGT TCCTGTCGAT GATCGGCCTG
GTGCAGTGGC GCACGCTCGC GAAGTACCGG CGCATCGCCA TCATCGTGAA CGTGATCGCG
GCCGCGATCA TCACGCCCAC CGGCGACCCG CTCAACCTCG CGCTCATGGC CGTGCCGATG
ATCGTCTTCT ACGAGGTCGG CATCGTGCTG GCCCGGATCC TCGGCAAGAA GCCCGCCGCG
GACGCCGCCC CCGCGGCCTA G
 
Protein sequence
MSETVPQLPP PPSPEPEGEV KLSFLDHLRD LRVRMVRAML GIAIGMGLVG GFVPQIVDHL 
MKPVRDALPA GRQQLVYTSA IEPMMVYIKV AMYGGVFVAA PWVLWQLWLF IAPGLYKREK
KVVFPFLFWG TLLFYLGALF CFELVMPQAF PAMLAFAESD TLSPMLSLSE QLSLVLAMLL
GFGVVFEVPV VIAFLSMIGL VQWRTLAKYR RIAIIVNVIA AAIITPTGDP LNLALMAVPM
IVFYEVGIVL ARILGKKPAA DAAPAA