Gene Mnod_8250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_8250 
Symbol 
ID7295465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011887 
Strand
Start bp451264 
End bp452370 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content76% 
IMG OID643592751 
Productefflux transporter, RND family, MFP subunit 
Protein accessionYP_002490383 
Protein GI220915075 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.673804 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACGCA CCTCACGGAT CCTGCTCGGC CTCGCGGTCG CGACGCCGGG CGCCCTGCTG 
CTCGCCGGGA CGGGCGGCGC GCCGGCTCGC CCGGACCCGG ACCAGCCGGT CAAGCCGCTC
GCCGTCGAGA CGAGCCGGGT CTCCGACACG CCCCTCGGCC GCGGCGTCAC CGCCGTCGCG
TCGCTCCGGG CGGTCCAGCA GGTGACCCTG TCGCCCGAAG TCGATGGGCG CGTGGTCGCG
ATCCACTTCC AGGAGGGCGC ACGGGTCGAG GCCGGCGCCC CGATCCTCGA CCTGTTCCGG
GATCCGCAGC AGGCGGAGCT GAACCGGAGC CGCGCCGAGG AAACGCTGGC ACGGCTGCAG
CTCGATCGGG CGCGCGCGCT GCTGCAGCGG GAGGCCACGG CGCAGGCGGA GGTCGACCGC
CGCCAGGCGG GCCTCGACCA GGCCGTCGCT CAGCGGCAGG CCGCCGAGGC CGCCCTCGCG
CAACGGGTGG TGCGCGCGCC CTTCGCCGGC GAACTCGGCC TGCGGCGCAC GGATCCCGGC
CATTACCTGC GGGCCGGCGA TCCGATCGTG ACGCTCACCG CGCTCGATGC ACTCTACGTC
GATTTCGCGG TCCCGCAGCG ATACCTCGCC GACCTGCGCG AGGGGCAGGC CGTGGAGGTG
GCGAGCGACG CAGCGGGAGG CCGGACCGTC CTGGCGCGCC TCGACACGAT CGAGCCCCAG
ATCGATCCCG GGACCCGCAA CATCCGCCTG CGCGCCCGTC TCGACAATCG GGACCGCTCG
CTGCGCCCGG GCGCCTCGGT CACGGCGACG CTGCGCTTCG CGCCCGAGCG CGGCGTGGTC
ACCGTGCCGG AGACCGCCAT CGTGGCGAGC GCAGCCACCG ACACGGCCTT CGTGGTGCGC
GACCTCGACG CGGACGGCCA TGGCCACGTC GCGCAGGTCT CCGTCACCAC GGGACGGCGC
AGCGAGGGCC GCATCGTCGT CAGCGCGGGC CTGGAGCCCG GCGAGGTCGT CGTCACCGCC
GGGCAGCTCC GCCTCTCCCC GGGACAGCCG GTGCGGCTGG AAGCGCGCCA CGCCGCCTCC
GCGGCGCCGG AACCCGCCCT GCGGTGA
 
Protein sequence
MRRTSRILLG LAVATPGALL LAGTGGAPAR PDPDQPVKPL AVETSRVSDT PLGRGVTAVA 
SLRAVQQVTL SPEVDGRVVA IHFQEGARVE AGAPILDLFR DPQQAELNRS RAEETLARLQ
LDRARALLQR EATAQAEVDR RQAGLDQAVA QRQAAEAALA QRVVRAPFAG ELGLRRTDPG
HYLRAGDPIV TLTALDALYV DFAVPQRYLA DLREGQAVEV ASDAAGGRTV LARLDTIEPQ
IDPGTRNIRL RARLDNRDRS LRPGASVTAT LRFAPERGVV TVPETAIVAS AATDTAFVVR
DLDADGHGHV AQVSVTTGRR SEGRIVVSAG LEPGEVVVTA GQLRLSPGQP VRLEARHAAS
AAPEPALR