| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_8224 |
|---|
| Symbol | |
|---|
| ID | 7295439 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011887 |
|---|
| Strand | + |
|---|
| Start bp | 432776 |
|---|
| End bp | 433966 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643592731 |
|---|
| Product | L-carnitine dehydratase/bile acid-inducible protein F |
|---|
| Protein accession | YP_002490363 |
|---|
| Protein GI | 220915055 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.204991 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACGA CCGAATTCCT CAGTGAGTAC CGTGGCAAGG GTCCGCTTCG GAACGTCACC
GTCCTCGACT TCACCCAGAT GATGATGGGC CCGGTCGCCA CGCAGTTGCT CGGCGACCTC
GGGGCCGTGG TGATCAAGGT CGAACGGCCC GTCAACGGGG AGTGGGAACG CAGCTACATG
CCGCGCGGCC GCCGGCTCCA CGGCGAGTCC CCCTACTTCC TGGCAATGAA CCGCAACAAG
CTGGCGGTCA CGGCCGACCT CAACGACGAG GCCGACCGGA GCTTCCTGTT CGATCTCGTG
AAGTCCTGCG ACGTCGTGGT CGAGAACTTC CGCCCCGGCG TGATGGACAA GCTCGGCTTC
GGCTACGACG ACCTGGTGAA GCACAATCCG CGTCTGGTCT ACGCGTCCGG CTCGGGCTTC
GGGGCCGAGG GGCCGCTCGT AAAGCGGCCC GGGCAGGACA TGCTGCTCCA GTCGATGAGC
GGGCTCGCCG CCAACAGCGG CCCGGGGAAC GGTCCGCCCG TCCCGGTCGC GGCGCCGATC
CTCGACGCCT CCACGGGATT CCTCCTGAGC TTCGCGATCG CGTCGGCGGT CCTCGACGCG
CGGGAGAACG GCACGCCGCG CCAGATCGAG GCGAGCCTCC TGGGGACCTC CCTCATGATC
CAGTGCCAGG AGGCCCTCGT CTCCATGAAC ACCGACCTGA CGTGGGAGCG CAGTTCCTCG
GGCATCGCGG CCCCGTGGAC CGATGCGCCC TACGGCGTCT ACCAGACGCG GGACGGCTTC
ATGGCGATGT CGATGACGCC GCGCGCGAAG CTCGCCGAGA TCTTCGCGCT CGATCCGTCG
CTCGTCGCGT GCACCGATGA CGAGTGGTTC CTGCGCCGCG ACGAGATCAA CGCGATCCTG
GTCGAGAAGC TGCGCACCCG GACGTCGGAC GAGTGGATCG CCGAGCTGAC CGAGAAGGGC
ATGTGGGTCG CGCCTGTCCA GTCCGTCGCC GAGATGGTGC GCCATCCGCA GGTCGAGGCC
AACGGCTACG TCGAGGCGAT CGATGCGCCC GGCGGCAAGC AGGTCCAGGC GGTCGGCCTG
CCTTTCCGCA TAAGCGGGGT CCACGGCGCG AACCGGCTTC CCGTGCCGAC GATCGGCCAG
CATGACGCGG TCGTGCGGCA GGCGCTCGCT GGCCGCAAGC CGCAGGGTTG A
|
|---|
| Protein sequence | MSTTEFLSEY RGKGPLRNVT VLDFTQMMMG PVATQLLGDL GAVVIKVERP VNGEWERSYM
PRGRRLHGES PYFLAMNRNK LAVTADLNDE ADRSFLFDLV KSCDVVVENF RPGVMDKLGF
GYDDLVKHNP RLVYASGSGF GAEGPLVKRP GQDMLLQSMS GLAANSGPGN GPPVPVAAPI
LDASTGFLLS FAIASAVLDA RENGTPRQIE ASLLGTSLMI QCQEALVSMN TDLTWERSSS
GIAAPWTDAP YGVYQTRDGF MAMSMTPRAK LAEIFALDPS LVACTDDEWF LRRDEINAIL
VEKLRTRTSD EWIAELTEKG MWVAPVQSVA EMVRHPQVEA NGYVEAIDAP GGKQVQAVGL
PFRISGVHGA NRLPVPTIGQ HDAVVRQALA GRKPQG
|
|---|
| |