Gene Mnod_8178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_8178 
Symbol 
ID7295794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011887 
Strand
Start bp388662 
End bp389783 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content69% 
IMG OID643592689 
Productpeptidase M20 
Protein accessionYP_002490321 
Protein GI220915013 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAATC CCGAGGTATT GGCTCTCGAT CTGGTGCGCT TCGATACGAT CAGCCCGCCG 
GGCTCAGAGA GCGCCTGCGC GGCGCACCTT GCGGTGCTGC TCCGCCGGGC TGGCTTCGAT
GTAACCGACT ATCCGTTCGC CCCCGGCCGC ACGAGCTTGG TTGCCCGCCT GCCGGGCACG
AACCCGGCCC TCGCCCCGCT TGTCTTCACC GGTCACCTCG ACACGGTCCC GCTCGGCAGC
GCACCGTGGT CGTTCGACCC ACGCGGTGAG ATCCGTGACG GGCGCCTCTA CGGACGGGGC
GCGTCCGACA TGAAGGCCGG CGTCGCCGCC TTCGTCGCGG CGGTGCTCGA TGTGGCCCAC
TCCGCAGCGG TGCTGACGCG CGGGGTCACC CTGGTGCTCA CGGCAGGTGA GGAGACCGGA
TGCCTGGGGG CCGCCGATCT CGCCCGGCGC GGCGTGCTGG GTGAAGCCAG CGGCCTTGTT
GTCGCCGAGC CGACCTCCAA CCGTTTGGCC CTCGCTCATA AGGGCGCGCT CCACCTGCGC
GCCCGAACGC ATGGTGCAAC GGCCCACGGG TCCATGCCCG AACTCGGCGA CAATGCCGTG
CTCAAGGCAA CGCGTGCAGT CGAGGCGCTC CGGAATTTCG AGTTCGGCGT TCCCACTCAC
CCACTGCTTG GATCGCCGAC GCTGGCCGTG ACGAGCCTGC ACGGTGGCGA GGCTGTCAAC
GTCATCCCGG ACAGCTGCAC GCTGACCCTC GACCTTCGCA CCCTGCCCGG TCAGGACCAC
GCTCGCACGC TCGCCATGCT GCAGGACCAG CTGGGGCCGG ATGTCGTGTT CGACCCTCCA
CTGGCCGATC TGCCCGCGGT CGGTACCGAG CCATCGGATG GGTTCGCGAT GGCGGCCGCG
CGGAGCGTTC GTAAGGTCAC GCAGGAGGTG GGCGAGGCGA TCGGGATGCC GTATTTCACC
GACGGCTCGG TGCTGCAGGG GGCCTTCGGT GGGTGCCCGA CCGTGATCCT CGGCCCTGGT
GAGCCCGGAC AAGCGCATCA GACGAACGAG TGGTGCGCGA CAAGCGCCAT TACGATCGCG
CACCGGATTT ATGGCGCTCT GGTCCAGGAA TGGTGCGCCT GA
 
Protein sequence
MNNPEVLALD LVRFDTISPP GSESACAAHL AVLLRRAGFD VTDYPFAPGR TSLVARLPGT 
NPALAPLVFT GHLDTVPLGS APWSFDPRGE IRDGRLYGRG ASDMKAGVAA FVAAVLDVAH
SAAVLTRGVT LVLTAGEETG CLGAADLARR GVLGEASGLV VAEPTSNRLA LAHKGALHLR
ARTHGATAHG SMPELGDNAV LKATRAVEAL RNFEFGVPTH PLLGSPTLAV TSLHGGEAVN
VIPDSCTLTL DLRTLPGQDH ARTLAMLQDQ LGPDVVFDPP LADLPAVGTE PSDGFAMAAA
RSVRKVTQEV GEAIGMPYFT DGSVLQGAFG GCPTVILGPG EPGQAHQTNE WCATSAITIA
HRIYGALVQE WCA