| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_8006 |
|---|
| Symbol | |
|---|
| ID | 7295835 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011887 |
|---|
| Strand | - |
|---|
| Start bp | 233386 |
|---|
| End bp | 234546 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643592536 |
|---|
| Product | Mandelate racemase/muconate lactonizing protein |
|---|
| Protein accession | YP_002490168 |
|---|
| Protein GI | 220914860 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
|---|
| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.848631 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGTGA AGCAGGTTCG GATCTACGTG GTCGAGAGCG GCGGCATCAG GCCGGTCATC
CTCGAGATGA CGACCGACGA CGGTACAGTG GGACTGGGCG AGGCGGCGGT TGCCTACGGT
CTCGGTGGAA CGGCGGCGGC CGCCATGATC AGGGAGCTCT GCGAGCGCTG CGTCATCGGC
CGGGACCCGT TCCGGGTCGA GGCCATCTGG ACGGAGATGT ACGACTGTTC CTTCTGGGCG
AAGGGCGGCG GTCCGATCGT GTTCGGCGCG ATGAGCGCGA TCGAGCAGGC CCTGGTGGAC
ATCAAAGCGA GGGCGCTTCG CGTTCCTGCC TACGAGTTGC TCGGCGGGCG CGTTCACGAT
GCGTTGCGGA CCTACGCGAA TGGCTGGTAC TTCGGCTGCG CGGATCTGGC CGATCTGCCG
CGTTTCGCCG AGGCGACCGT GGCGGATGGG TACGATGCGC TGAAGCTCTA CCCCTTCGCC
ACGATCCTCG AGACCGGCAG GTTGCGGCAC CCATCACGCC GCGGGACGTC CGACGGTGAC
GTGCGCCGGC GGGCCGTCGC AGCCGTCGCC AGCGTGCGGG CCGCCCTCGG ACCCGGGCCC
AAGATCATGC TGGACTTGAG TGGCGGTCTC ACCCCTGACG AGACGATTCG CTTCTGCCGC
GAGGTCGAGG AATTCGACAT CACCTACGTC GAGGAGCCCG CAGACCCGTT CGACCCGCAT
GCCTTGAGCA AGATCGCCAG CGGCATCTCC CAACCGATCG CGGTCGGCGA ACGCATCTAC
ACGCGCTATG GCTTTCGGGA CCTGCTCGCC GGGAGAGCCG TCGATATCCT GCAGCCGGAC
CTCGGCAATA CGGGCGGCAT TCTCGAGGGC CGCAAGATCG CCGCGATGGC GGAAGCATAT
GGTGTGAAGG TCCAGCCGCA TGTCTGTGCG AGCGCCCTCT CCACGGTGAT CGCGATGCAT
TTCAGCGCCG CCACGCCCAA CTTCTACATG CAAGAGCATT TCCCCTACTG GGATCGCATC
CCGGGCTACA CCCAGGTGCT GGAGGACCCG ATCGAGCCGC AGGTCAAGGC TGGGACGATT
CCGGTGTTGG ATGCGATCGG GTACGGCGTA ACGCTCCGCA ACAGGAGCCT GCTCGATTGC
CTTTGGACTG AGTGTCGATA G
|
|---|
| Protein sequence | MRVKQVRIYV VESGGIRPVI LEMTTDDGTV GLGEAAVAYG LGGTAAAAMI RELCERCVIG
RDPFRVEAIW TEMYDCSFWA KGGGPIVFGA MSAIEQALVD IKARALRVPA YELLGGRVHD
ALRTYANGWY FGCADLADLP RFAEATVADG YDALKLYPFA TILETGRLRH PSRRGTSDGD
VRRRAVAAVA SVRAALGPGP KIMLDLSGGL TPDETIRFCR EVEEFDITYV EEPADPFDPH
ALSKIASGIS QPIAVGERIY TRYGFRDLLA GRAVDILQPD LGNTGGILEG RKIAAMAEAY
GVKVQPHVCA SALSTVIAMH FSAATPNFYM QEHFPYWDRI PGYTQVLEDP IEPQVKAGTI
PVLDAIGYGV TLRNRSLLDC LWTECR
|
|---|
| |