| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_8003 |
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| Symbol | |
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| ID | 7295832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium nodulans ORS 2060 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011887 |
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| Strand | + |
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| Start bp | 226128 |
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| End bp | 227510 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 643592533 |
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| Product | type I secretion membrane fusion protein, HlyD family |
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| Protein accession | YP_002490165 |
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| Protein GI | 220914857 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01843] type I secretion membrane fusion protein, HlyD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGATCT GGTCCGCCGA AACACTGCCC GCAGCTCGAC CATCCCACTC TGTCGGGGAG
CGGCCAGACG CCGCAGGCGA GCAGCAAAGC TTGATTGGTC TGACCAGCTG GCGGCGGTAC
GCAATTGCGG GCTACGCCGT TATCTTGGCG ACATTTGGAG TCATGGGCAG CTGGGCGGCT
GTCGTTCGCC TCGATCGGGC CGTCATCAGT CCCGGCGTGA TCGTCGCGGA GAGCAGCCGC
AAGATCGTCC AGCATTTCGA GGGCGGCATG ATCCTGGAGG TGCTGGTGAA GGACGGCCAG
AGCGTTCAGG AAGGCGACGT CCTCCTGCGC ATCGATCCTC TCCAATCCCG TGCGAGCGCT
GATCTGTTCA GAACGCAGCT CGATGCCGCC CTGATCCTTG AGGCACGCCT CCGAGCCGAA
CAGAATCAAG CAAGCGAACT GGAACTGCCG CCGGAACTCA TCGCGCGTCG GAACGAGCCC
GCAATTGCCC GCATGATCAA GGACCAGACG ATCCAACTGG CGGAGCGACA AAGGTCTCTA
AAGTCTCAGC TCGATCTCAT CGACGCTCGA GTGAAGCAGT TGAAGACCGA AATGGTGGGG
CTCGCGGTCG AGAAAGCCTC GGTCCAGGCA CAGGTGGGCT TTATCAACCA GGAGCTTGAG
GGCCTCCGCA GCCTACGCGA GAAGAGTCTC ATCCCGCTCT CACGGCTCCT TGTCATGGAG
CGAGAGCGCA CGCGGCTCGA GGGAGTGATC GGACGCTCAG TGGCGGAGAC GGCCAAGGCG
CAGAACGCCA TCGGCGAAGC CGGAATGCAG ATTACGCAGC TCAAGCAGAA GATGCAGGAA
GTCACTACTG CGCAACTGCT GGAAACACGC CAGAAGATTG CCGAGCTTCG CGAGAAGCTC
CTCGTCGCCC AGGATGTACT CAGACGACAT GAGATCCGCG CCTCGCACAG CGGAGTCGTT
CAAGGTCTCA AGGTCTACAC GATTGGGCAG GTCGTTCGTT CGGGAGAGCC GCTGATGGAA
ATCGTCCCGA CGAGCGACAG GCTTGTGATC AGCGTCCAAT TCTCGCCCAA TGATCTGGAA
GCGATTCATG CGGGGATGAG AGCCGAGGTC AAATTCCCGA CCTTCCAGAC GCGCCGGACC
CCGGCGATAT TCGGGACGCT CAAGACCGTC TCACGCGACC GCTTGATCGA CGACACGACG
AAGCAGGCCT ACTTTTCCGG TATCGTCGAG ATCGACGAGC ACCAGGTTCC GAATGACATA
AAGCACCGCT TGCTGGCAGG GCTTCCAGCC GAAGTTGTCG TCTCGGCCGG TGAGCGAACA
GCACTCGACT ACATGGTCGC ACCCTTGTTC GACGCGATGG GGCACGCCTT CCATGAGCGT
TAG
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| Protein sequence | MTIWSAETLP AARPSHSVGE RPDAAGEQQS LIGLTSWRRY AIAGYAVILA TFGVMGSWAA
VVRLDRAVIS PGVIVAESSR KIVQHFEGGM ILEVLVKDGQ SVQEGDVLLR IDPLQSRASA
DLFRTQLDAA LILEARLRAE QNQASELELP PELIARRNEP AIARMIKDQT IQLAERQRSL
KSQLDLIDAR VKQLKTEMVG LAVEKASVQA QVGFINQELE GLRSLREKSL IPLSRLLVME
RERTRLEGVI GRSVAETAKA QNAIGEAGMQ ITQLKQKMQE VTTAQLLETR QKIAELREKL
LVAQDVLRRH EIRASHSGVV QGLKVYTIGQ VVRSGEPLME IVPTSDRLVI SVQFSPNDLE
AIHAGMRAEV KFPTFQTRRT PAIFGTLKTV SRDRLIDDTT KQAYFSGIVE IDEHQVPNDI
KHRLLAGLPA EVVVSAGERT ALDYMVAPLF DAMGHAFHER
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