Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mnod_7974 |
Symbol | |
ID | 7295623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium nodulans ORS 2060 |
Kingdom | Bacteria |
Replicon accession | NC_011887 |
Strand | + |
Start bp | 195764 |
End bp | 197407 |
Gene Length | 1644 bp |
Protein Length | 547 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643592511 |
Product | alpha amylase catalytic region |
Protein accession | YP_002490143 |
Protein GI | 220914835 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGAGAGA CTGCTGACAA ACTCGATCGG TCACGCTTGA ATGATGCTCA TTCACCGGCA GATAGACCAT GGTGGCAGCA GGAGGTCATT TATCAGATCT TCACGCCATC GTTCCAGGAC TCGAATGGCG ACGGCATCGG AGATCTCGCC GGAATCCTCT CGCGCGTCGA CTACCTCGCC CGGCTCGGCA TCGGGGCGGT CTGGCTGACG CCCATCTATC CCTCGCCCCT GCTCGATGCT GGCTACGACA TCGCCGACTT CACCGGCGTC GGCTCCTGCT TCGGCGATCT CGCCACCTTC GACCGGTTGC TCACGGCCCT GCACGACCGC GGCATCCGCC TGATCCTCGA CCTCGTGCCC AACCACACTT CGGATCAGCA CCCCTGGTTC ATCGAGAGCC GGTCCTCCCG CTACAACCCG AAGCGCGACT GGTACATCTG GGCGGATCCG GTTCCCGGGC CTCTGCCGCC CAACAACTGG CTCAGCCGGT TCGGCGCCAG CGCCTGGGCC TACGATCCCA CGACCGGCCA GTCCTACTAT CACGCCTTCC TGCCCGAGCA GCCGGACCTG AACTGGCGCA ACCCTCAGGT CCGAGCGGCG ATTCACGACG CGATGCGCTT CTGGTTGCGA CGCGGCGTCG ACGGCTTCCG CGTCGATGCC GCCGCAGTCC TGGCTGAGGA CGCGCTCCTT CGGGATGAGC CGCCGAACCC GGACTTCGAC GGCGACACGC CGCGCCCCGA GCGCTTCCGG CGCACCCGGA CGGACAGCCA GGCGGTCACC CGCGGTTACT TGACCGAACT GCGTCGCGTG GTGGACGAGT TCCCGGATCG CGTGCTGTTG GGCGAGGTCG ATACCACTCC AGACAAGCTG CCGAGCTTCT ACGGCGAGGA CGAGCCGCGC CTCCACCTGC CGCTGAACTA CCGTCTGCTG GAGGTGCCCT GGAAGCCGGA CGCCGTCGGC CGTGCAGTCC AGGCCTTCCT CGACACGATG CCGGAGAGCG CCTGGCCCGA CTGGGTGCTG GGGAGCCACG ACAAGCCCCG GATCGCCAGC CGCCTCGGCC CCGAGCAGGC GCGGGTCGCC GCGATGCTGC TCATGACGCT GCCGGGCACG CCGATCCTGT ACGCAGGTGA CGAGATCGGG ATGGAGAACG TCCCGGTGCC GCCTGCGCTG GGGCAAGATC CGTTCGAGCG GTGCGTGCCG GGCTACGGCC TGAGCCGCGA CCCGTTCCGG GTGCCCTTGC GTTGGGCGCC CGAGTCGGGT GCGGGCTTCA CCACCGGCGA GCCGTGGCTG CCAACGGGAC CGCTGCCGCT CGGATCGACC GTGGCCGAGC AGGAGGAGGA TCCGTGCTCG CTGCTGGCGC TGTACCGGCG GCTCACCGGC CTGCGGCGCG ACAGGCCGGA GCTGCAGGCC GGCCGCTACC GGCGGATCCT GAGCGAAGGC GGCGTGCTCG CCTACGCGCG CTGGCTCGAC GGGTCGGGGC TCGTCATAGC GTTGAACCTC AGCGCCTCGG ACGTGGCGCC GACCTTGGAC TGCCGCGGTC GGGTCGTCCT CGGAACAGTC CTCGACCGCG ACGGCGAGCG GATCGACGGC TGCATCCGGC TATCTCCGCA TGAGGGCGTG ATCATCGCGG CCGAGGACGG CTGA
|
Protein sequence | MRETADKLDR SRLNDAHSPA DRPWWQQEVI YQIFTPSFQD SNGDGIGDLA GILSRVDYLA RLGIGAVWLT PIYPSPLLDA GYDIADFTGV GSCFGDLATF DRLLTALHDR GIRLILDLVP NHTSDQHPWF IESRSSRYNP KRDWYIWADP VPGPLPPNNW LSRFGASAWA YDPTTGQSYY HAFLPEQPDL NWRNPQVRAA IHDAMRFWLR RGVDGFRVDA AAVLAEDALL RDEPPNPDFD GDTPRPERFR RTRTDSQAVT RGYLTELRRV VDEFPDRVLL GEVDTTPDKL PSFYGEDEPR LHLPLNYRLL EVPWKPDAVG RAVQAFLDTM PESAWPDWVL GSHDKPRIAS RLGPEQARVA AMLLMTLPGT PILYAGDEIG MENVPVPPAL GQDPFERCVP GYGLSRDPFR VPLRWAPESG AGFTTGEPWL PTGPLPLGST VAEQEEDPCS LLALYRRLTG LRRDRPELQA GRYRRILSEG GVLAYARWLD GSGLVIALNL SASDVAPTLD CRGRVVLGTV LDRDGERIDG CIRLSPHEGV IIAAEDG
|
| |