Gene Mnod_7953 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_7953 
Symbol 
ID7295602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011887 
Strand- 
Start bp177279 
End bp177962 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content69% 
IMG OID643592492 
Productisochorismatase hydrolase 
Protein accessionYP_002490124 
Protein GI220914816 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1535] Isochorismate hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.315447 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACCGCA AGCCGTGGGA CGGCCTGATC TCCGAGGAGG AGCAGCGGGC CTACAACGCC 
GCCGGGTTCG GCCGTGCGAC CGGCCTCGGG CGCCGGCCGG CCCTCCTCAT CATCGACGTG 
CAGTACCGCA CGACCGGGAC GACGCCGATG CCGTTCTGGG AGGCGATCAA GGAATATCCC 
ACCGCGTGCG GCGACGTCGC CTGGGCGGCG GTGGAGCGGA TCGAGCGGCT GCTCGGATTG 
TTCCGCGAGC GCGGCTGGCC CGTCCTCTAC CCGCTCGTCG CGCCCAAGGC GGCCTTCGAC 
CGGGGACGCC TGTCCGACAA GGTGCCGGCG ATCATGACCG TCGCCGCGAA AGGCTACGAA 
TTCCCCCCCG AGATCGCGCC GCGCGAGGGC GACATCCTGC TGCCGAAGAA GCATCCGAGC 
GCCTTCTTCG GCACGCCGCT CACGAGCTAC CTCATCAATC TCCAGGCCGA CAGCCTCGTG 
GTGACGGGCT GCTCCACGAG CGGATGCGTG CGCGGGAGCG TCGTCGATGC CTTCGCGTAC 
AACTTCCGGG TCCTGGTGCC CCACGATGCC GTCTACGACC GCAGCGCCAC CTCGCACGCG 
GTCAACCTGT TCGACATGGC CTCGAAATAC GCGGACGTGA TGTCGACGGA CGAGGCCCTG 
GAAGCCCTGC GCGCGCTGGT CTGA
 
Protein sequence
MDRKPWDGLI SEEEQRAYNA AGFGRATGLG RRPALLIIDV QYRTTGTTPM PFWEAIKEYP 
TACGDVAWAA VERIERLLGL FRERGWPVLY PLVAPKAAFD RGRLSDKVPA IMTVAAKGYE 
FPPEIAPREG DILLPKKHPS AFFGTPLTSY LINLQADSLV VTGCSTSGCV RGSVVDAFAY 
NFRVLVPHDA VYDRSATSHA VNLFDMASKY ADVMSTDEAL EALRALV