Gene Mnod_7952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMnod_7952 
Symbol 
ID7295601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium nodulans ORS 2060 
KingdomBacteria 
Replicon accessionNC_011887 
Strand
Start bp176048 
End bp177202 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content68% 
IMG OID643592491 
ProductExtracellular ligand-binding receptor 
Protein accessionYP_002490123 
Protein GI220914815 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.351177 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACAGA GCGCGCCATC CGTCAGCCGC CGGGCCTTCC TGGCGGCATC GCTCGCGGCG 
GCGGCCATCG GGCCCGCTCG GGCCGAGGAG GCGCTGCGCT TCGGCATGGC GATGCCCCTG
TCGGGCGGTC AGGCGACCTA CGGCCAGGAC CAGGTCAAGG CGGCCGAGTG GGCCGTGGCG
GCCATCAACG AGAGGGGCGG GGTCGCCGGC CGCAAGCTCG AGATGATCGT GCTCGACACC
CGCGCGGATC CGCAGGCGGG CATTCAGGCC GCGAACCGGC TGATCTCGGT CGACAAGGTG
CCGGTCTTCG TCAGCGCGTG GTCGGCGGTG GTCAAGGCAG TGGCCCCCGT GGCGAATGAC
AGCCGCACGG TGCAACTCTC GGTCGGCGCG AATTCCGCCG AGATCGCCCG GCTCGGGGAT
TACACCTACA CCACCTTCCC GCTCGCCTCG GTCGACATCA CGGCGGTGGC GACCTACGCC
GCCAAGCAGA TGGGCAAGAA GCGGGCGGCT GTCCTCTACA TCAACAACGA GACCGGGACG
GTCGCGGCGC AGATCTACCG CGACGTCTTC GCCAAGTCCG GCGGGCAGGT CGTGGCCTAC
GAGGCCTATG ATCCGCGCGC GTCGGATTGG ACCGGACCGC TGCTCAAGGT CCGGGCCGCG
CAGCCCGACA TCGTGCATAT CCAGGGCCTC GTCGCCGATA CGCCGCAGGT GATCGCGCAG
ATGCGCCAGC TCGGCCTCAC GCTGCCGGTC TCGTCCTATT CGGCGGTCTA CAATCCGAAG
CTGATCGAGC AGCTCGGCAA GGCCGCCGAG GGCGTCATCG CCACCTCGCT GGCGCCGGGC
GTCACCGACA GTCCCGCCGT GGCGGCCTAT GTCGAGCGCT GGAAGAAGGA AGTCGGCCGG
GAGCCGAACG GCCTGCCCTA TACCCAGTAT CTCTACGATG CGCCTTACAT CGTGGCCGAG
GTCTACCGGT CGCTGATCGA GAAGAAGATC CCGCTCTCCG GCGAGAACTT CCGCAAGGAA
ATGCTGGCGA TCCGCAGCTT CGATCTGCCG CTCACCGGCA AGCTCGTCAT CAACGACGAC
CACACGGTGA ACAAGCCCGT CTTCCTGATG GAAGTGAAGG GCGGGCGCTG GGTGCAGAAG
GCGGTGGTCG AGTAG
 
Protein sequence
MRQSAPSVSR RAFLAASLAA AAIGPARAEE ALRFGMAMPL SGGQATYGQD QVKAAEWAVA 
AINERGGVAG RKLEMIVLDT RADPQAGIQA ANRLISVDKV PVFVSAWSAV VKAVAPVAND
SRTVQLSVGA NSAEIARLGD YTYTTFPLAS VDITAVATYA AKQMGKKRAA VLYINNETGT
VAAQIYRDVF AKSGGQVVAY EAYDPRASDW TGPLLKVRAA QPDIVHIQGL VADTPQVIAQ
MRQLGLTLPV SSYSAVYNPK LIEQLGKAAE GVIATSLAPG VTDSPAVAAY VERWKKEVGR
EPNGLPYTQY LYDAPYIVAE VYRSLIEKKI PLSGENFRKE MLAIRSFDLP LTGKLVINDD
HTVNKPVFLM EVKGGRWVQK AVVE