| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_7892 |
|---|
| Symbol | |
|---|
| ID | 7295532 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011887 |
|---|
| Strand | + |
|---|
| Start bp | 124727 |
|---|
| End bp | 125896 |
|---|
| Gene Length | 1170 bp |
|---|
| Protein Length | 389 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643592445 |
|---|
| Product | L-carnitine dehydratase/bile acid-inducible protein F |
|---|
| Protein accession | YP_002490077 |
|---|
| Protein GI | 220914769 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGACCGC TCAAGGGCTT TCGTGTCATT GAAATGGCCG GGATCGGTCC AGGACCGTTC
TGCGGCATGC TGCTGTCAGA CCTGGGTGCA CAAGTGCTCA GAGTCGAACG TCATGGGGCG
AGCGCCGATG CTCACGATCC ATTGCAACGC AATCGGTTGC GCTTGGCGCT GGACTTGAAG
GACCCGCAAC AAGTGGGTGT GCTGCTCGAC ATCGTCGAGC ACGCCGATGC TTTGTTCGAA
GGTTACCGTC CCGGTGTGGC AGAGCGTCTG GGCTTCGGGC CGGATGACTG CCTGCAACGC
AATGCAAAGC TCGTGTACGG GCGCATGACG GGCTGGGGGC AGGACGGGCC GCTCGCGAGC
ACCGCCGGAC ATGACATTAA CTACATCGCG TTGAGCGGCG CGCTGCATGC CATTGGCCGG
AGTGGCGAGC GGCCGGTACC GCCGCTGAAT TTGGTGGGAG ATTTTGGCGG CGGTGGCATG
TTGCTCGCGT TCGGCATGGT GTGCGCGCTG TTGGAACGTG AGCGGTCCGG ACAAGGGCAG
GTGGTGGATG CGGCGATGGT GGACGGCTCG ATCGCGCTGA TGGCCATGTT TCTGGGGATG
CAGGCGCGTG GCTTGAGCTG CAACCAAGTC GGTAGTCACT TTCTATCGGG CGCCGCGCAC
TACTACGATA CCTATCAAAC CAAGGATGGT AAATTCATGG CCGTGGGTGC GCTCGAGCCG
CAATTCTATG GCGAGCTCAT TGCCAAGGCC GGGCTCGATC CGAACGTGTT TGGTGGCAGC
AGCTTCATGA GCCCCGCCGG GCATGATCCG CGACGCTGGG CGGAGCTGAA ACCACTCCTC
GCCGAGCAAT TCATGACCCG CACGCGCGAT GAATGGTGTG CTGTGTTCGC AGGGAGTGAC
GCGTGCGTCG CACCAGTGCT GACACTCGAG GAAGCTGCTC AACATCCGCA CAATCGGGCA
CGGCATGCGT TCGTCACGGT CGCCGGTGTC ACGCAAAACG CGCCCGCTCC GCGCTTCAGT
CGCACGCCGG CAGCACACCC CGAGTTGGCC ACCGCCGACT CCACAGCAGT AGACGCACTA
CTGTCGCAAT GGGGCTGTAA CCGGGAGCAA CTGGTCAACA TCGCAGCACT TTCGGCGCAG
CGCGCGGTTG CAGCAGACAG CGCGTCATGA
|
|---|
| Protein sequence | MGPLKGFRVI EMAGIGPGPF CGMLLSDLGA QVLRVERHGA SADAHDPLQR NRLRLALDLK
DPQQVGVLLD IVEHADALFE GYRPGVAERL GFGPDDCLQR NAKLVYGRMT GWGQDGPLAS
TAGHDINYIA LSGALHAIGR SGERPVPPLN LVGDFGGGGM LLAFGMVCAL LERERSGQGQ
VVDAAMVDGS IALMAMFLGM QARGLSCNQV GSHFLSGAAH YYDTYQTKDG KFMAVGALEP
QFYGELIAKA GLDPNVFGGS SFMSPAGHDP RRWAELKPLL AEQFMTRTRD EWCAVFAGSD
ACVAPVLTLE EAAQHPHNRA RHAFVTVAGV TQNAPAPRFS RTPAAHPELA TADSTAVDAL
LSQWGCNREQ LVNIAALSAQ RAVAADSAS
|
|---|
| |