| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_7806 |
|---|
| Symbol | |
|---|
| ID | 7295756 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011887 |
|---|
| Strand | - |
|---|
| Start bp | 36821 |
|---|
| End bp | 37606 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643592374 |
|---|
| Product | Xylose isomerase domain protein TIM barrel |
|---|
| Protein accession | YP_002490006 |
|---|
| Protein GI | 220914698 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG4130] Predicted sugar epimerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTTCG CACTGAATCA TATTCTTGCG CCGAAGCTCC CGCTCGAGGA ATTCTTCGCT
TCTGCCCGCG CGCTCGGCGC GACGGAGGTC GAGATCCGCA ACGACCTGCC TGATGTCGTC
GGTACCGTTG CGCCCGAAGA GGTAAGGACC GCCGCCGAAA AGACAGGTGT GTCGATCATT
TCGATCAAAG CGCTCTATCC GTTCAACGTC TGGACGGACG ATATGGCGAA GCGCGCCGCC
AAGCTCGCTG CCTATGCGGC GGCCTGCGGC GCGAAGGCTC TGGTGATGTG CCCGCTCAAT
GAGGGCAAGG CCGTCGCGTT CGACGTCCTC GTCGCCTCGC TCAAGGCGAT GAAGCCCATC
CTTCTGGACC ACCGCCTGAC CGGCCTTGTC GAGCCGCTCG GCTTCCCGGT TTCCTCTCTT
CGCACCAAGA AGGAGGCGAT TGCAGCGATC AGGGCGGCCG ATGGGGCGGA CACCTACAGG
CTGGTGCACG ACACGTTCCA CCATCATCTC GCCGGCGAGA CGGAATTCTT TCCCGAGTGG
ACGGGGCTCG TGCACATCTC CGGCGTGACC GACCCCATCG TTGCGGTCGC CGACATGCTC
GATGCGCATC GCGTCCTCGT CGACGGCGCC GACCGTCTGG AGAACATCCC CCAGATCAGA
AGGCTGATCG CGGCGGGCTA TTCGGGTCCC TTCAGCTTCG AACCCTTCGC GACCGAGGTT
CATGAGCTTG AGGATCCCAA AGGCGCAGCG AAGCGGAGCA TGGACTTCGT GTCCGCTTCT
CTCTGA
|
|---|
| Protein sequence | MRFALNHILA PKLPLEEFFA SARALGATEV EIRNDLPDVV GTVAPEEVRT AAEKTGVSII
SIKALYPFNV WTDDMAKRAA KLAAYAAACG AKALVMCPLN EGKAVAFDVL VASLKAMKPI
LLDHRLTGLV EPLGFPVSSL RTKKEAIAAI RAADGADTYR LVHDTFHHHL AGETEFFPEW
TGLVHISGVT DPIVAVADML DAHRVLVDGA DRLENIPQIR RLIAAGYSGP FSFEPFATEV
HELEDPKGAA KRSMDFVSAS L
|
|---|
| |