| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mnod_7788 |
|---|
| Symbol | |
|---|
| ID | 7295738 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium nodulans ORS 2060 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011887 |
|---|
| Strand | - |
|---|
| Start bp | 15481 |
|---|
| End bp | 16524 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 643592360 |
|---|
| Product | plasmid partitioning protein RepB |
|---|
| Protein accession | YP_002489992 |
|---|
| Protein GI | 220914684 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1475] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | [TIGR00180] ParB-like partition proteins
[TIGR03454] plasmid partitioning protein RepB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.256779 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAGCGAC GCGACGCGAT CAAGAACCTC TACACTGCAC CCCCTGAGCC GGAGAAGTTG
GCCGTGGCCA ACACGCGTGC TGTCGTGGAG AATCCGCCGG AGCGGGTGCT CGCCGGCCCG
GTGCGCACAA TGGGACTCGC ACTTGGCCGT CTCGAGGAGG AGAGCCGGGC ACTGCAGGAT
GCACTGGCCA GCGGTGCCTC CGTCGTCGAA CTCGAGCCCG AGCACATTGA GAGCTCATTC
GTTCGCGATA GACTTGAGGA TTCAGGAACA GGCTATGAGG AGTTTCGGCG GTCCATAGCG
GAGCGCGGCC AGGAGGTACC AATCCTGGTG CGCCCGCATC CCGATAAGGC GGGACGTTAC
CAGGTCGCCT ATGGGCATCG CCGCCTCCGC GCAGTGGCAG AGCTCGGCCG GCGCGTGCGC
GCTCTTGTGC GCACGATGAG CGACGCCGAA CTCGTCGTCG CGCAAGGGAT CGAGAACTCC
GCCCGTCAGG ATCTCACCTA CATCGAGAAG GCGCTATTCG CCCGTCGGCT CGAAGACCGC
GGATTCGAGC GAACGGTGAT CATGGACGCG CTCTCCACCG ACAAGGGAGA ACTGTCCAAG
CTGATCTCTG TCGCCCGCGC TATACCCGAG GAGCTTGTCC AGACCATCGG ACCGGCGCCA
AAGGCCGGGC GGCGACGGTG GCTCGCTCTT GCGGAGCTTC TCTCCGATGC AGCATGCGCA
GCGAGCGCCC TGCGAATGGC GCGTGATCCC GATCTTGCGG GCCTCGACAG CGATACGCGC
TTCGTACGCG TCCTCGGCGC GGCAGCGCCA CGGCCGGCGG CGAGGGAGCG TCCGACAGCA
TGGCAGAGCG ACGGCGGCGT GACACGCGCG CGCATCTCCC GCGCCGGATC AACCGTCACG
CTCGCGATCG AGCGCGATCC TGCGTTCGGG GAGTTCATTG CCTCACGGCT GGATGACCTC
TATGCCGCCT ACCGTAGGGA TACCGACTCA TCCTCGGCAT CATCCGGCCC AGGTCGCGAT
GGAAGTGGTG TTCGCGAAAA CTGA
|
|---|
| Protein sequence | MKRRDAIKNL YTAPPEPEKL AVANTRAVVE NPPERVLAGP VRTMGLALGR LEEESRALQD
ALASGASVVE LEPEHIESSF VRDRLEDSGT GYEEFRRSIA ERGQEVPILV RPHPDKAGRY
QVAYGHRRLR AVAELGRRVR ALVRTMSDAE LVVAQGIENS ARQDLTYIEK ALFARRLEDR
GFERTVIMDA LSTDKGELSK LISVARAIPE ELVQTIGPAP KAGRRRWLAL AELLSDAACA
ASALRMARDP DLAGLDSDTR FVRVLGAAAP RPAARERPTA WQSDGGVTRA RISRAGSTVT
LAIERDPAFG EFIASRLDDL YAAYRRDTDS SSASSGPGRD GSGVREN
|
|---|
| |