| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Achl_3496 |
|---|
| Symbol | |
|---|
| ID | 7294977 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Arthrobacter chlorophenolicus A6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011886 |
|---|
| Strand | - |
|---|
| Start bp | 3870506 |
|---|
| End bp | 3872680 |
|---|
| Gene Length | 2175 bp |
|---|
| Protein Length | 724 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643591902 |
|---|
| Product | choline/carnitine/betaine transporter |
|---|
| Protein accession | YP_002489541 |
|---|
| Protein GI | 220914232 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1292] Choline-glycine betaine transporter |
|---|
| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 0.81429 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAGA ATGCAGTACC GCCCGTGGAC ACCACGGGTC CTGAGAAAGA AGAACGAAAG
CCACCCGCGA ACGGCGGAAA TACCAACCAC AGCGCCGGCC CGGCGGCCAA AACCCGGGTC
AACAAGACAG TCTTCCTGGG CTCCGCCACC GGCGTGGTGG CTATCGCCCT GTGGGCCATC
ATGGCCAAGG ACAACGCGGA GGCGGTCATC GGGGCCATGG TGGGCTGGGT GTCCACCAAC
ATGGGGTGGT ACTACTTCAT GATCGTCACC GCCGTGGTCA TCTTCGTCCT GGTGGCCGCC
CTCTCCCGGG TGGGAAAGAC GAAGCTCGGG CCGGACCACT CCAAACCACA GTTCGGCATG
TTCACCTGGG CGGCCATGCT GTTTGCCGCC GGCATAGGCA TCGACCTGAT GTTCTTCTCC
GTGTCTGAAC CGGTGAGCCA GTACCTGGCC CCGCCGCAGG GCGAGGGCGG AACCGCGGAG
GCCGCCCGCC AGGCGCTGGT GTGGACGCTG TTCCACTACG GCATCACAGG CTGGGCGCTG
TACGCCCTCA TGGGGCTCGC GCTGGGCTAC TTCTCCTACC GGCACAACCT GCCGCTGAGC
ATCCGCTCCG CCCTCTACCC CATCTTCGGC AAGAAGATCG AGGGCCCAGT AGGGCACGCG
GTGGACATCG CGGCCCTCCT TGGCACCATC TTCGGGATCG CCACGTCACT GGGCATCGGC
GTCGTCCAGC TCAACTACGG GCTGAACTTC ATGTTCGGCA TTCCGGAGGA CCTGGCCGTG
CAGATCGGCC TGATCGTCCT GTCCGTAGTG ATGGCTACCG TGTCCGTGGT TTCCGGCGTC
GAGAAGGGAA TCCGGCGGCT CTCCGAGCTC AACGTGATCC TGGCCGTCGC CCTGATGCTT
TTCGTCCTGG TCACCGGTAA GACCAGCTTC CTGCTGGACG GGATCGCCCA AAACATCGGT
GACGTTATGA GCCGGTTCCC CGCGATGACC CTGGACACGT TCGCCTATGA CCGGCCCACG
GACTGGATGA ACGCCTGGAC CCTGTTCTTC TGGGCCTGGT GGATCGCCTG GGCACCGTTC
GTCGGCCTGT TCCTGGCCCG CATTTCCCGC GGCCGCACCA TCCGCCAGTT CGTCCTGGGC
ACCATGACCG TGCCGTTCAT CTTCATCGTG CTGTGGATCT CCATCTTTGG AAACTCCAGC
CTCGACCTGA TCATGAACGG CAACGCGGCG TTCGGCGAGG CGGCCATGAG CCACCCGGAA
CGCGGCTTCT ACAGCCTGCT GGAACAGTTC CCCGCCGTGC CCGTCACCGC CGCGGTGGCC
ACGTTCACCG GGTTGCTCTT CTACGTGACC TCGGCCGATT CCGGCGCCCT GGTGATGTCC
AACTTCACCT CGCACCTCAA GGATGCCGAT TCCGACGGCC CCGAGTGGAT GCGCGTCTTC
TGGGCAGTGG CCACCGGCCT GCTGACCCTG GCCATGCTGA CGGTGGGTGG TGTTCCCACG
CTGCAGAACG CGACCATCAT CATGGGACTG CCGCTCTCGC TGCTGCTGGT GCTGATCATG
CTGGGGCTCT ACAAGGCGCT GCGGGTGGAG AACTCGCTCA ACGACAGCTA CCGCGCCAGC
CTGCCTGGCA TCATTACCGG CCGGTCCCTG GACCAGCGGG GCGGACGGAC CTGGCGGCAG
CGGCTCAGCC GCGCCATGAG CTACCCGGGC CGCAAACAGA CAACGCGCTT CGCCGAAACC
GTGGCCCTGC CGGCCCTGAA GGATGTCGAG GCGGAGCTCA AGTCCCAGGG TGCCGAGACG
TCCCTGACCG TAACCACCGT GGAGCCGTGC GGCATCAACA GCATCGACCT GCAGCTGGCC
ATGGGGGAGG AACGGGCGTT CAAGTACCAG ATCTACCCGG TCCAGTATGA GACGCCCAGC
TACGCCACCC GCCGTGCCGA TCCGGAAGAC CGCTACTACC GGATGGAGGT GTTCTCGCAG
GAGGGCAGCC ACGGCTACGA CCTCATGGGG TACACCCGCG AGCAGGTCAT CACCGATGTG
CTGGACCACT ATGAGCAGCA CCTTGAATTC CTGCACCTGA ACCGTGCAGC ACCCGGAAAC
ACCGTCCTGG TCGAGGACCA GGTGGCCAAA GACAATTGGG AATCAGACTT CGACATGCAG
GAGGAAACGA AATGA
|
|---|
| Protein sequence | MSQNAVPPVD TTGPEKEERK PPANGGNTNH SAGPAAKTRV NKTVFLGSAT GVVAIALWAI
MAKDNAEAVI GAMVGWVSTN MGWYYFMIVT AVVIFVLVAA LSRVGKTKLG PDHSKPQFGM
FTWAAMLFAA GIGIDLMFFS VSEPVSQYLA PPQGEGGTAE AARQALVWTL FHYGITGWAL
YALMGLALGY FSYRHNLPLS IRSALYPIFG KKIEGPVGHA VDIAALLGTI FGIATSLGIG
VVQLNYGLNF MFGIPEDLAV QIGLIVLSVV MATVSVVSGV EKGIRRLSEL NVILAVALML
FVLVTGKTSF LLDGIAQNIG DVMSRFPAMT LDTFAYDRPT DWMNAWTLFF WAWWIAWAPF
VGLFLARISR GRTIRQFVLG TMTVPFIFIV LWISIFGNSS LDLIMNGNAA FGEAAMSHPE
RGFYSLLEQF PAVPVTAAVA TFTGLLFYVT SADSGALVMS NFTSHLKDAD SDGPEWMRVF
WAVATGLLTL AMLTVGGVPT LQNATIIMGL PLSLLLVLIM LGLYKALRVE NSLNDSYRAS
LPGIITGRSL DQRGGRTWRQ RLSRAMSYPG RKQTTRFAET VALPALKDVE AELKSQGAET
SLTVTTVEPC GINSIDLQLA MGEERAFKYQ IYPVQYETPS YATRRADPED RYYRMEVFSQ
EGSHGYDLMG YTREQVITDV LDHYEQHLEF LHLNRAAPGN TVLVEDQVAK DNWESDFDMQ
EETK
|
|---|
| |