| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Achl_3106 |
|---|
| Symbol | |
|---|
| ID | 7294586 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Arthrobacter chlorophenolicus A6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011886 |
|---|
| Strand | - |
|---|
| Start bp | 3449994 |
|---|
| End bp | 3452051 |
|---|
| Gene Length | 2058 bp |
|---|
| Protein Length | 685 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 643591516 |
|---|
| Product | short chain dehydrogenase |
|---|
| Protein accession | YP_002489156 |
|---|
| Protein GI | 220913847 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only
[S] Function unknown |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
[COG3347] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR02632] rhamnulose-1-phosphate aldolase/alcohol dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGCGCA TAACTCTCAT GACCACCAAC AAGACTGTCG AAGACCTGAT TTCCCGTTCC
AACCGCCTGG GCGCGGACAA ACGGAACACC AACTTCGCCG GCGGGAACAC CTCCGCGAAG
GGCACCGAGA AGGACCCCGT CACCGGCGAA GACGTCGAAC TCCTGTGGGT CAAGGGCTCC
GGCGGAGACC TCGGCACGCT GAAGGCCCAG AACCTGGCGG TGCTGCGGTT GGACCGGCTG
AACGCGCTGA AGAACGTCTA CCCGGGCGTG GAGCGCGAAG ACGAAATGGT GGCCGCCTTC
GATTACTGCC TGCACGGCAA GGGCGGCGCA GCCCCCTCGA TCGATACCGC CATGCACGGC
CTGGTGGACG CCGCACACGT GGACCACCTG CACCCGGACT CGGGCATCGC CATCGCGACG
GCGGTGGACG GCGAGGCGCT GACCACCAAG ATCTTCGGTG ACAAAGTGGT CTGGGTTCCC
TGGCGCCGTC CCGGATTCCA GCTGGGCCTG GACATCGCTG CGATCAAGGA CGCCAACCCG
CAGGCCATCG GCACCATCCT GGGCGGCCAC GGCATCACCG CCTGGGGCGC CACCAGCGAA
GAAGCAGAGC AGAACTCGCT GTGGATCATC GACCAGGCCG AAAAGTACAT CAGGGACAAC
GGCAAGGCTG ACCCCTTCGG CGCCAGGCTC CCGGGCTACG CAGCCCTGCC CGAAGCGGAG
CGCCGTGCCA AAGCCGCAGC CCTGGCACCG GTGATCCGCG GCCTGGCCTC CACGGACAAG
CCGCAGCTGG GGCACTTCAG CGATGACGCC GTCGTCCTGG ACTTCCTCGA AGCTGCCGAG
CACCCGCGCC TGGGCGCCCT GGGCACCTCC TGCCCGGACC ACTTCCTGCG CACCAAGGTC
AAACCGCTGA TCCTGGACTT GCCGGCCGAC GCCTCCATTG AGGACTCGAT CGCACGGCTG
CACGAACTGC ACGCCGACTA CCGCGAGGAC TACCAGGCCT ATTACGACCG GCACAAGGAC
GCGGACAGCC CGGCGCTGCG CGGCGCGGAC CCGGCCATCG TGCTGGTCCC CGGTGTGGGC
ATGTTCTCCT TCGGCGCGAA CAAGCAGACC GCCCGGGTGG CCGGTGAGTT CTACATCAAC
GCCATCAACG TGATGCGCGG TGCCGAGGCG ATTTCCACCT ACGCCCCCAT CGAGGAATCC
GAGAAGTTCC GGATCGAGTA CTGGGCGCTG GAGGAAGCCA AACTGGCCCG GATGCCCAAG
CCCAAGTCGC ACGCAACCCG CATCGCACTG GTCACCGGTG CGGCATCCGG GATCGGCAAG
GCCATCGCCA CCCGCCTCGC CGCGGAAGGC GCCTGCGTGG TCATCGCCGA CCTGAACCTT
GAGAACGCAC AGAAGGTGGC CGAAGAACTC GGCGGGCCGG ACGTCGCCGT CGGCGTCCAG
GCGGACGTGA CCGACGAAGC GCAGGTCGCG GCAGCGATCG ACGCCGCTGT CCTGGCGTTC
GGCGGCGTGG ACCTGGTGGT CAACAACGCC GGCCTGTCCA TCTCCAAGCC GCTGCTGGAA
ACCACCGAAA AGGACTGGGA CCTGCAGCAC AACGTGATGG CCAAGGGCTC CTTCCTGGTG
GCCAAAGCCG CCGCGAAGGT CATGATCGCC CAGGGCCTGG GCGGGGACAT CATCTACATC
TCCTCCAAGA ACTCCGTGTT CGCCGGGCCC AACAACATCG CCTACTCCGC CACGAAGGCA
GACCAGGCCC ACCAGGTGCG CCTGCTCGCC GCGGAGCTGG GCGAGCACGG CATCCGCGTC
AACGGCATCA ACCCCGACGG CGTGGTCCGC GGCTCCGGCA TCTTCGCCGG CGGCTGGGGC
GCCAAGCGCG CCGCGGTGTA CGGCGTGGAC GAGGAGAAAC TGGGTGAGTA CTACGCCCAG
CGCACCCTGC TCAAGCGCGA AGTCCTGCCC GAGCACGTGG CCAACGCCGC CGCCGTCCTC
ACCAGCAACG AACTGTCCCA CACCACCGGC CTGCACATCC CCGTGGACGC CGGAGTGGCC
GCAGCCTTCC TCCGGTGA
|
|---|
| Protein sequence | MGRITLMTTN KTVEDLISRS NRLGADKRNT NFAGGNTSAK GTEKDPVTGE DVELLWVKGS
GGDLGTLKAQ NLAVLRLDRL NALKNVYPGV EREDEMVAAF DYCLHGKGGA APSIDTAMHG
LVDAAHVDHL HPDSGIAIAT AVDGEALTTK IFGDKVVWVP WRRPGFQLGL DIAAIKDANP
QAIGTILGGH GITAWGATSE EAEQNSLWII DQAEKYIRDN GKADPFGARL PGYAALPEAE
RRAKAAALAP VIRGLASTDK PQLGHFSDDA VVLDFLEAAE HPRLGALGTS CPDHFLRTKV
KPLILDLPAD ASIEDSIARL HELHADYRED YQAYYDRHKD ADSPALRGAD PAIVLVPGVG
MFSFGANKQT ARVAGEFYIN AINVMRGAEA ISTYAPIEES EKFRIEYWAL EEAKLARMPK
PKSHATRIAL VTGAASGIGK AIATRLAAEG ACVVIADLNL ENAQKVAEEL GGPDVAVGVQ
ADVTDEAQVA AAIDAAVLAF GGVDLVVNNA GLSISKPLLE TTEKDWDLQH NVMAKGSFLV
AKAAAKVMIA QGLGGDIIYI SSKNSVFAGP NNIAYSATKA DQAHQVRLLA AELGEHGIRV
NGINPDGVVR GSGIFAGGWG AKRAAVYGVD EEKLGEYYAQ RTLLKREVLP EHVANAAAVL
TSNELSHTTG LHIPVDAGVA AAFLR
|
|---|
| |