Gene Achl_2221 details

Gene Information

• Locus tag: Achl_2221
• Symbol: rimM
• ID: 7293689
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Arthrobacter chlorophenolicus A6
• Kingdom: Bacteria
• Replicon accession: NC_011886
• Strand: -
• Start bp: 2492044
• End bp: 2492589
• Gene Length: 546 bp
• Protein Length: 181 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 643590624
• Product: 16S rRNA-processing protein RimM
• Protein accession: YP_002488276
• Protein GI: 220912967
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0806] RimM protein, required for 16S rRNA processing
• TIGRFAM ID: [TIGR02273] 16S rRNA processing protein RimM

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 11
• Fosmid unclonability p-value: 0.000000000411195
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGCAGCTCC AGGTGGCCCG CATCGGCAAG CCCCACGGCA TCCGCGGGGA AGTCACGGTC 
CAGGTAATGA CCGACGCCCC CGGGGACCGT TTCGTCCCCG GTGTGGAGTT CGTGGTGGAA 
CCTGCGCAGT CCGGGCCGCT GACAGTCAGC AGCGCCCGCT GGAACAAGGA CATCCTGCTG 
CTGGCCTTCG AGGAAATCGA GGACCGCAAC CAGGCTGAGA CGCTCCGTGG CGCCAAGCTC 
TTCATCGAAA CAGCGGAACT GGACGAGGAC GATGAAGACG GCTGGTACGA GCATGAGCTC 
GTGGGCCTCG AAGCCCGTGT GGGCAGCACG GTCGTGGGCA AGGTGACCGC CCTCAACACC 
GCCCCGGCGC AGGACCTGCT GATGGTCACC ACCCCGGACG GCGAGGAAAT CCTGATCCCC 
TTCGTCGAGC AGATTGTCCC CGAAGTCAAT GTCGGCGAGG GGTACATCCT CCTCACCCCG 
CCGGACGGGC TCTTCGAAGT CAACTCCGGC GAAGCCGCAC CGTCGGAACC CGAAGGCACC 
GACTAG 

 

Protein sequence

MQLQVARIGK PHGIRGEVTV QVMTDAPGDR FVPGVEFVVE PAQSGPLTVS SARWNKDILL 
LAFEEIEDRN QAETLRGAKL FIETAELDED DEDGWYEHEL VGLEARVGST VVGKVTALNT 
APAQDLLMVT TPDGEEILIP FVEQIVPEVN VGEGYILLTP PDGLFEVNSG EAAPSEPEGT 
D