| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Achl_2028 |
|---|
| Symbol | secF |
|---|
| ID | 7293489 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Arthrobacter chlorophenolicus A6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011886 |
|---|
| Strand | - |
|---|
| Start bp | 2288482 |
|---|
| End bp | 2289498 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643590432 |
|---|
| Product | preprotein translocase subunit SecF |
|---|
| Protein accession | YP_002488091 |
|---|
| Protein GI | 220912782 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0341] Preprotein translocase subunit SecF |
|---|
| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.000000000424362 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGGCT TCGCCAATTT CGGAAATGAG CTCTACACCG GGAAGCGCTC CTACGAATTC
GTGGGATCCA AGAAGATCTG GTTCCTGATC GCTCTGGTGG GCGTGGCGCT GTCCATCATC
ATCCCGGTGG CCAAGGGCGG GTTCAACCTG GGCATCGAGT TCCGGGGTGG CTCCGAATTC
ACTGTCTCCA ACGTGAAGAC CACGGACGCC ACGGTGGGGG AGAAGGCCGT TACAGACGTT
GTGGCCGGCA GTGTTCCGCG TGTGGCCAAC GTGGCCGGAA CCACCATGCG CATCCAGACG
GACAAGCTCA CGGACGACGA GACGCTCCGC ATCAAGGAGG GCCTGCATAC CGCGTACGGT
GTCACTGAGA ACGAAGTGAC CTCCACGTTC GTGGGCCCAA CCTGGGGCGC GGACGTCACC
AAGCAGGCAT TGATCGGCCT GGTAGTGTTC GTCCTCCTGG CCGCCGTGCT GATGGCCCTG
TACTTCCGCA CGTGGAAGAT GTCCGTCTCG GCCCTCGCCG GCATGCTCGT CACTATGTTC
ATCACCGCCG GGGTGTACGC CCTCAGCGAC TTTGAAGTGA CCCCGTCAGC AATCATCGGG
TTCCTGACGG TGCTCAGCTA CTCCCTCTAC GACACCGTGG TGGTCTTCGA CAAGATCCGC
GAGAACACGG CGGAAATTGA CTCCTCAACC CGCCGCACGT TCGCCGAGGA GGTCAACCTC
GCCGTGAACC AGACGCTGGT CCGCTCCATC AACACCATGA TGGTGGCGAT CCTCCCGGTG
GGCGCCATCC TGTTCATCGG CGCCGGCCTG CTGGGCGCGG GAACCCTGCG GGACCTCTCG
TTGGCCCTGT TCGTGGGAAT CCTGATCGGT ACGGCTGCCA CCATCTTCGT AGCGGCGCCC
ATGTACGCCT GGCTGCGGCA GAACGAACCG GACCTGGTCA AGCAGGCCCG GCGTGTGGAG
CAGCGCCGCA GCAGCACCGC CGAGCGCAAT GCTTCAGCGG AGCCTGCCCA GGCCTGA
|
|---|
| Protein sequence | MSGFANFGNE LYTGKRSYEF VGSKKIWFLI ALVGVALSII IPVAKGGFNL GIEFRGGSEF
TVSNVKTTDA TVGEKAVTDV VAGSVPRVAN VAGTTMRIQT DKLTDDETLR IKEGLHTAYG
VTENEVTSTF VGPTWGADVT KQALIGLVVF VLLAAVLMAL YFRTWKMSVS ALAGMLVTMF
ITAGVYALSD FEVTPSAIIG FLTVLSYSLY DTVVVFDKIR ENTAEIDSST RRTFAEEVNL
AVNQTLVRSI NTMMVAILPV GAILFIGAGL LGAGTLRDLS LALFVGILIG TAATIFVAAP
MYAWLRQNEP DLVKQARRVE QRRSSTAERN ASAEPAQA
|
|---|
| |