Gene Achl_1963 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAchl_1963 
Symbol 
ID7293424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameArthrobacter chlorophenolicus A6 
KingdomBacteria 
Replicon accessionNC_011886 
Strand
Start bp2211038 
End bp2212777 
Gene Length1740 bp 
Protein Length579 aa 
Translation table11 
GC content65% 
IMG OID643590367 
Product2-isopropylmalate synthase 
Protein accessionYP_002488026 
Protein GI220912717 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0119] Isopropylmalate/homocitrate/citramalate synthases 
TIGRFAM ID[TIGR00970] 2-isopropylmalate synthase, yeast type 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.000000246456 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGAAACG CACAGAAGTC CTCCGGAATG CCCTTCCACC GTTACACGCC GTTCCAGGAC 
CAGATCACCG TCGAGATGCC GGACCGTACC TGGCCGGACA AGGTAATCAC CAAGGCTCCG
CGCTGGTGTG CAGTGGACCT GCGGGACGGC AACCAGGCGC TGATCGATCC CATGAGCCCG
GCACGCAAAA TGAAGATGTT CGATCTGCTG GTCCGCATGG GCTACAAGGA GATCGAGGTC
GGTTTTCCGT CCGCATCGCA GACTGACTTC GACTTTGTCC GCCAGCTGAT CGAGGGCAAC
CACATCCCGG ATGATGTCAC CATCCAGGTC CTCACCCAGG CCCGTGAGCA CCTGATCGAG
CGGACCTACG AATCCCTCGT GGGCGCGAAG CAGGCCATCG TCCACCTGTA CAACTCCACG
TCCGTGCTGC AGCGGCGCGT GGTCTTCAAC CAGGACGAGG ACGGGATCCT CGACATCGCA
CTCCAGGGTG CGCGGCTGTG CCGGAAGTAC GAGGAAACGC TGGCCGACAC GCACATCACG
TACGAATACT CACCGGAGTC CTTCACCGGC ACGGAACTGG AATACGCCGT TCGCGTCTGC
AACGCCGTCG CCGATGTCTT TGAAGCCTCG GCAGACCGGC AGGTCATCAT CAACCTGCCG
GCCACCGTAG AAATGGCCAC CCCGAACGTG TACGCCGATT CGATTGAATG GATGAGCCGG
CACCTGCACC CCCGCGAGGG CATCATCCTC TCGCTGCACC CGCACAACGA CCGCGGGACC
GGCGTGGCCG CCGCCGAACT GGGCTACATG GCCGGCGCAG ACAGGATTGA AGGCTGCCTG
TTCGGCAACG GGGAGCGTAC CGGCAACGTG GACCTGGTGA CCCTGGGGCT GAACCTGTTC
GTGCAGGGCA TCGACCCGAT GATCGACTTC TCCGACATCG ACGACGTCCG CCGGACCGTT
GAATACTGCA ACCAGCTGCC TGTCCCCGAG CGGTCCCCGT ACGGCGGCGA CCTGGTGTTC
ACTGCCTTCT CCGGCTCCCA CCAGGACGCC ATCAAGAAGG GCTTCGAGGC CCTGGAACGG
GACGCTGCCG CCGCCGGCAA GGACGTAGCG GACGTCACCT GGCAGGTGCC CTACCTGCCG
GTGGACCCCA AGGACCTGGG CCGCAGCTAC GAGGCCGTCA TCCGCGTCAA CTCCCAGTCC
GGTAAGGGCG GTGTGGCCTA CCTGCTCAAG AACGAGCACA GCCTGGACCT GCCCCGCCGG
GCCCAGATCG AGTTCTCCGG TGTCATCCAG CGGCGCACGG ACACCGTGGG CGGCGAAGTC
AGCGGCGCCC AGCTCTGGCA GATCTTCCAG GACGAGTACC TGCCCTCCGG CAAGGCTGAC
GGCCAGTGGG GCCGCTACTC CCTGGGTTCG GTCAAGACCG AGACCGATGA CGACGGCGGC
ATGACGCTGC ACGCGTCCCT CACCGTCGAC GGTGCCCAGG TCAGCCGTAC CGGTACCGGA
AACGGGCCCA TCGCCGCGCT GCTGAACATC CTCACCCAGG ACGGTGTTGA CGTCCGCGTC
CTGGACTACA GCGAGCACGC CCTGTCCGAA GGAGGCAATG CGATGGCCGC AGCGTATGTC
GAATGCGCAG TGGGCGAGCG CGTCCTGTGG GGCGTGGGCA TCGACGCCAA CACCAGCATG
TCCTCGCTGA AGGCCGTAAT CTCCGCCGTC AACCGGGCCA TCCGCGACGC CCAGTCCTGA
 
Protein sequence
MRNAQKSSGM PFHRYTPFQD QITVEMPDRT WPDKVITKAP RWCAVDLRDG NQALIDPMSP 
ARKMKMFDLL VRMGYKEIEV GFPSASQTDF DFVRQLIEGN HIPDDVTIQV LTQAREHLIE
RTYESLVGAK QAIVHLYNST SVLQRRVVFN QDEDGILDIA LQGARLCRKY EETLADTHIT
YEYSPESFTG TELEYAVRVC NAVADVFEAS ADRQVIINLP ATVEMATPNV YADSIEWMSR
HLHPREGIIL SLHPHNDRGT GVAAAELGYM AGADRIEGCL FGNGERTGNV DLVTLGLNLF
VQGIDPMIDF SDIDDVRRTV EYCNQLPVPE RSPYGGDLVF TAFSGSHQDA IKKGFEALER
DAAAAGKDVA DVTWQVPYLP VDPKDLGRSY EAVIRVNSQS GKGGVAYLLK NEHSLDLPRR
AQIEFSGVIQ RRTDTVGGEV SGAQLWQIFQ DEYLPSGKAD GQWGRYSLGS VKTETDDDGG
MTLHASLTVD GAQVSRTGTG NGPIAALLNI LTQDGVDVRV LDYSEHALSE GGNAMAAAYV
ECAVGERVLW GVGIDANTSM SSLKAVISAV NRAIRDAQS