Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Achl_1416 |
Symbol | ispG |
ID | 7292865 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Arthrobacter chlorophenolicus A6 |
Kingdom | Bacteria |
Replicon accession | NC_011886 |
Strand | + |
Start bp | 1582536 |
End bp | 1583702 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643589824 |
Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
Protein accession | YP_002487495 |
Protein GI | 220912186 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.000000000988526 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGACCTCGG TCAGCCTGGG AATGCCCGCA GCACCGCCGC CCGTCCTTGC CCCGCGCCGC AAGACGCGCC AGATCAAAGT CGGTTCGGTG GGAGTTGGCT CGGATTCCCC CATCAGCGTG CAGTCGATGA CCACCACGCC CACCACCGAC ATCAACGCCA CATTGCAGCA GATCGCGGAA CTGACCGCCT CCGGTTGCGA CATCGTGCGC GTTGCATGCC CGTCGGCCGA TGATGCCGAA GCATTGCCCA TCATTGCCCG CAAGTCCCAG ATTCCGGTCA TCGCGGACAT CCACTTCCAG CCCAAGTACG TCTTCGCTGC CATCGAAGCC GGCTGCGCGG CCGTCCGGGT CAACCCCGGC AACATCCGCA AGTTCGACGA CCAGGTCAAG GAAATTGCTG CGGCCGCCCG GGACCACGGA ACGTCCATCC GCATCGGCGT CAACGCCGGC TCGCTGGAAC CGGGGATCCT CAAGAAGTAC GGCAAGGCCA CCCCCGAAGC CCTCGTTGAA TCCGCCGTCT GGGAAGCCTC GCTGTTTGAA GAGCACGGCT TCCACGACTT CAAGATCTCG GTCAAGCACA ACGACCCCGT GATCATGGTG GCCGCCTACG AGATGCTCGC CGAAAAGGGC GACTGGCCCC TCCACCTCGG CGTGACCGAG GCCGGTCCGG CATTCCAGGG AACCATCAAG TCCGCCACCG CCTTCGGCGC ACTGCTCTCC CGTGGCATTG GCGACACCAT CCGCGTCTCC CTCTCGGCCC CGCCCGTTGA GGAGATCAAG GTGGGGAACC AGATCCTGCA GTCGCTGAAC CTGCGGCCCC GCAAGCTCGA AATCGTGTCC TGCCCGTCCT GCGGCCGCGC GCAGGTGGAC GTCTACACGC TCGCGGAGCA GGTCACAGCC GGCCTGGAAG GCATGGAGAT CCCGCTGCGC GTCGCCGTCA TGGGCTGTGT GGTCAACGGG CCGGGCGAGG CACGCGAAGC CGACCTCGGC GTCGCTTCCG GCAACGGCAA GGGACAGATC TTTGTGAAGG GTGAAGTCAT CAAGACTGTG CCGGAGAGCC AGATTGTTGA GACACTGATC GAAGAGGCCA TGCGTATCGC GGAAGAGATG GGGGAGGCCG ATGGCGAAGA TGCTGTCAAA GGTGGCCCCG TGGTTAGCGT CTCGTAA
|
Protein sequence | MTSVSLGMPA APPPVLAPRR KTRQIKVGSV GVGSDSPISV QSMTTTPTTD INATLQQIAE LTASGCDIVR VACPSADDAE ALPIIARKSQ IPVIADIHFQ PKYVFAAIEA GCAAVRVNPG NIRKFDDQVK EIAAAARDHG TSIRIGVNAG SLEPGILKKY GKATPEALVE SAVWEASLFE EHGFHDFKIS VKHNDPVIMV AAYEMLAEKG DWPLHLGVTE AGPAFQGTIK SATAFGALLS RGIGDTIRVS LSAPPVEEIK VGNQILQSLN LRPRKLEIVS CPSCGRAQVD VYTLAEQVTA GLEGMEIPLR VAVMGCVVNG PGEAREADLG VASGNGKGQI FVKGEVIKTV PESQIVETLI EEAMRIAEEM GEADGEDAVK GGPVVSVS
|
| |