Gene Achl_1416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAchl_1416 
SymbolispG 
ID7292865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameArthrobacter chlorophenolicus A6 
KingdomBacteria 
Replicon accessionNC_011886 
Strand
Start bp1582536 
End bp1583702 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content65% 
IMG OID643589824 
Product4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 
Protein accessionYP_002487495 
Protein GI220912186 
COG category[I] Lipid transport and metabolism 
COG ID[COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis 
TIGRFAM ID[TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.000000000988526 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACCTCGG TCAGCCTGGG AATGCCCGCA GCACCGCCGC CCGTCCTTGC CCCGCGCCGC 
AAGACGCGCC AGATCAAAGT CGGTTCGGTG GGAGTTGGCT CGGATTCCCC CATCAGCGTG
CAGTCGATGA CCACCACGCC CACCACCGAC ATCAACGCCA CATTGCAGCA GATCGCGGAA
CTGACCGCCT CCGGTTGCGA CATCGTGCGC GTTGCATGCC CGTCGGCCGA TGATGCCGAA
GCATTGCCCA TCATTGCCCG CAAGTCCCAG ATTCCGGTCA TCGCGGACAT CCACTTCCAG
CCCAAGTACG TCTTCGCTGC CATCGAAGCC GGCTGCGCGG CCGTCCGGGT CAACCCCGGC
AACATCCGCA AGTTCGACGA CCAGGTCAAG GAAATTGCTG CGGCCGCCCG GGACCACGGA
ACGTCCATCC GCATCGGCGT CAACGCCGGC TCGCTGGAAC CGGGGATCCT CAAGAAGTAC
GGCAAGGCCA CCCCCGAAGC CCTCGTTGAA TCCGCCGTCT GGGAAGCCTC GCTGTTTGAA
GAGCACGGCT TCCACGACTT CAAGATCTCG GTCAAGCACA ACGACCCCGT GATCATGGTG
GCCGCCTACG AGATGCTCGC CGAAAAGGGC GACTGGCCCC TCCACCTCGG CGTGACCGAG
GCCGGTCCGG CATTCCAGGG AACCATCAAG TCCGCCACCG CCTTCGGCGC ACTGCTCTCC
CGTGGCATTG GCGACACCAT CCGCGTCTCC CTCTCGGCCC CGCCCGTTGA GGAGATCAAG
GTGGGGAACC AGATCCTGCA GTCGCTGAAC CTGCGGCCCC GCAAGCTCGA AATCGTGTCC
TGCCCGTCCT GCGGCCGCGC GCAGGTGGAC GTCTACACGC TCGCGGAGCA GGTCACAGCC
GGCCTGGAAG GCATGGAGAT CCCGCTGCGC GTCGCCGTCA TGGGCTGTGT GGTCAACGGG
CCGGGCGAGG CACGCGAAGC CGACCTCGGC GTCGCTTCCG GCAACGGCAA GGGACAGATC
TTTGTGAAGG GTGAAGTCAT CAAGACTGTG CCGGAGAGCC AGATTGTTGA GACACTGATC
GAAGAGGCCA TGCGTATCGC GGAAGAGATG GGGGAGGCCG ATGGCGAAGA TGCTGTCAAA
GGTGGCCCCG TGGTTAGCGT CTCGTAA
 
Protein sequence
MTSVSLGMPA APPPVLAPRR KTRQIKVGSV GVGSDSPISV QSMTTTPTTD INATLQQIAE 
LTASGCDIVR VACPSADDAE ALPIIARKSQ IPVIADIHFQ PKYVFAAIEA GCAAVRVNPG
NIRKFDDQVK EIAAAARDHG TSIRIGVNAG SLEPGILKKY GKATPEALVE SAVWEASLFE
EHGFHDFKIS VKHNDPVIMV AAYEMLAEKG DWPLHLGVTE AGPAFQGTIK SATAFGALLS
RGIGDTIRVS LSAPPVEEIK VGNQILQSLN LRPRKLEIVS CPSCGRAQVD VYTLAEQVTA
GLEGMEIPLR VAVMGCVVNG PGEAREADLG VASGNGKGQI FVKGEVIKTV PESQIVETLI
EEAMRIAEEM GEADGEDAVK GGPVVSVS