Gene Cyan7425_5219 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan7425_5219 
Symbol 
ID7291174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7425 
KingdomBacteria 
Replicon accessionNC_011884 
Strand+ 
Start bp5321898 
End bp5322974 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content51% 
IMG OID643588177 
Product4-hydroxyphenylpyruvate dioxygenase 
Protein accessionYP_002485873 
Protein GI220910562 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins 
TIGRFAM ID[TIGR01263] 4-hydroxyphenylpyruvate dioxygenase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.910123 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATCG ATCACATTCA TTTCTATGTT GACAATGCCC AGCGATCGCG AAATTGGTGT 
GAGGAAATTC TTGGTTTTAC CCCGGTGGAA AGCCGCATCA GTCCCCACAG CCACACTGAA 
ATTTTAATTA ATGGCGGGAT TACGTTTGTT TTTTCTGCGC CCCTGACCGC GGCCAGTCCT 
GTCGCCCAGT TTTTACAATT CCAACCCCCT GGTGTGGCGG ATCTGGCCTT TCGGGTCAAT 
TCCCTGGCAG AAGTTCTGCA GCAAGCCACC CTGAACGGGG CTAAACAATT GCAACCCTTG 
CAAGCCCATA AGCAGGCAGG AGGAGAATTG AAATGGAGTC AAATCCAGGG CTGGGGAACC 
CTTAAACATA CACTGGTTGA ACGAACCGGG ATCACCTCTG TTTGGCCGGC CGAGGAGAGT 
GGTGGGGATC AGGGTCAGGA GCAGTGTCCG GGCAGGGCTG AGCATTCCCA CTTTAGCGGC 
ATTGACCACG CGGTTTTAAA CCTGGCGGAT CGGGATTTTG CGGCGGCGAT CGCCTGGTAT 
CAGCAAACCT TAGGCTTTCA GACTGATCGA GCATTTTCGA TTCAAACTCG GCGATCAGGT 
CTACGCAGTC AGGTGCTGAT CCATCCCCAG GGTACGGCCC AACTCCCACT TAATGCTCCA 
GTTTCAACCG GATCTCAAAT TCAGGAATTT TTAGAGCTGA ATCGGGGAGC AGGAATCCAA 
CATTTGGCAC TGCAAACCAG CGACATTACG ACCACGATCG CCCAATTGCG CCAACGGGGC 
CTGGCTTTTC TGGAAACCCC AGACTGTTAC TACAGCCATC TACAGGACCG CATAGCAAAA 
AGCAATTTAA ACCTGGAGAT TAGCCCACTC AAAGCACAGG GCATTCTGGT GGATTGGCAA 
TCAGAACAAC CCCACAGTTT ACTCTTACAA ATTTTTACGC AACCCATTTT CAATCAACCC 
ACTTTTTTCC TGGAAATCAT TGAACGGCGG CAGCAGGCCC AGGGTTTCGG GGAAGGTAAC 
TTTCTGGCCT TATTTGAGGC GATCGAGCGG GAACAGATGA AACGAGGGTC TTTATAG
 
Protein sequence
MNIDHIHFYV DNAQRSRNWC EEILGFTPVE SRISPHSHTE ILINGGITFV FSAPLTAASP 
VAQFLQFQPP GVADLAFRVN SLAEVLQQAT LNGAKQLQPL QAHKQAGGEL KWSQIQGWGT 
LKHTLVERTG ITSVWPAEES GGDQGQEQCP GRAEHSHFSG IDHAVLNLAD RDFAAAIAWY 
QQTLGFQTDR AFSIQTRRSG LRSQVLIHPQ GTAQLPLNAP VSTGSQIQEF LELNRGAGIQ 
HLALQTSDIT TTIAQLRQRG LAFLETPDCY YSHLQDRIAK SNLNLEISPL KAQGILVDWQ 
SEQPHSLLLQ IFTQPIFNQP TFFLEIIERR QQAQGFGEGN FLALFEAIER EQMKRGSL