| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_5170 |
|---|
| Symbol | |
|---|
| ID | 7291124 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | + |
|---|
| Start bp | 5267032 |
|---|
| End bp | 5267619 |
|---|
| Gene Length | 588 bp |
|---|
| Protein Length | 195 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643588127 |
|---|
| Product | LemA family protein |
|---|
| Protein accession | YP_002485824 |
|---|
| Protein GI | 220910513 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1704] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.212302 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGACCGC TGATTTTTCT AGTGGTAGTG GTGCTGGTCG TCGGTGTCAT TGCCGTCAAT
GCCTACAACA GCCTGGTTAC TCTGCGGAAT CGCTACAAAA ATGCCTACAA ACAAATTGAT
GTACAGCTAC AGCGGCGCTA CGATTTGATT CCCAACCTGG TGGAAACCGC CAAGGGCTAC
ATGAAACACG AACGGGAAAC GCTGGAAGCG GTGATCAATG CCCGCAATAC CGCTTTAGCT
GCCAGCAGTC AGGCGGCCCG TCAACCCGGC GATGCCCAGG CCATGCAACA ACTGGAAGCC
GCAGAAACGG CCCTGTCTGG TGCCCTCAGT CGTCTGCTGG TTTTATCGGA AGCCTACCCG
GATCTAAAGG CCAATCAGAC GATGCTGCAG TTGATGGAAG AGTTAACCTC CACGGAAAAC
CGGGTGGCCT TCGCCCGCCA GGCTTTTAAT GATGCTGTTA CCCTTTACAA CACCAAGCGG
GAAGTGTTCC CCAGCAATTT GATTGCCGGT TCCTTTAACT TTGCTGAAGC CCAACTCTTG
CAGGACGTCG CTCCAGAAGT GAAAGCGGCT CCCCGAGTTT CGTTCTAG
|
|---|
| Protein sequence | MGPLIFLVVV VLVVGVIAVN AYNSLVTLRN RYKNAYKQID VQLQRRYDLI PNLVETAKGY
MKHERETLEA VINARNTALA ASSQAARQPG DAQAMQQLEA AETALSGALS RLLVLSEAYP
DLKANQTMLQ LMEELTSTEN RVAFARQAFN DAVTLYNTKR EVFPSNLIAG SFNFAEAQLL
QDVAPEVKAA PRVSF
|
|---|
| |