| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_5091 |
|---|
| Symbol | |
|---|
| ID | 7291044 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | + |
|---|
| Start bp | 5183114 |
|---|
| End bp | 5185027 |
|---|
| Gene Length | 1914 bp |
|---|
| Protein Length | 637 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 643588048 |
|---|
| Product | MscS Mechanosensitive ion channel |
|---|
| Protein accession | YP_002485746 |
|---|
| Protein GI | 220910435 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
[COG3264] Small-conductance mechanosensitive channel |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00148956 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0183068 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGGGTA TTCTTCTCCA ACCCCAAAGC AGCCCATTCC CCCTGCTGTT CCTGGCTGCT
GTCAGTCCCC CCCTTTTGCC TGCTCTGGGA GTTTTTTCAC TCATCATCAT TTTGATGGCA
GTGACGATCG GCGATCGGCT GATTGTGCGG GGGATGAACC GCTTTCGCGT CTGGTTAACG
CCCTGGTTCA AGTCACAGCC CTCTCCCTGG CTGGAACTGA GTTGGAGCTT ATTGCAGTGG
GGATTGCGCC TGGGCCTGTG GCTACTGGGG GTGATTGGCG TTTTACTGCT ACCCGCCTCC
AATCCGTTAC AACGCTGGTT ACTGCTGACC TTTACCCCCG TGGTCAATCG GTTGACTAGC
CTGCTGGTCA CTCCCCTGTT CACCCTGGGC AAAGCAACGA TCACCCTCAC CTCCCTGTTC
ACCCTGATTG TGGTCAGCCT GGCCCTTTTG TTGCTGTCCC GCTGGCTGAG GAATTGGATT
AAACAGCGCG TTCTCACCCG CCTGGGACTC GATCGGGGTA ACCAGGAGGC GATCGCCGGG
GTGATCGGTT ATTTGTTCAC CGCCCTGGGA ATTATTATTG TTCTGCAGAC GATCGGCATT
GATCTGAGTT CGCTGGCCGT GCTGGCAGGG GTGCTGGGGA TTGGGCTAGG GTTTGCCTTC
CAACAACTTG CCAGTAATTT TATTAGTGGT CTGACCCTGC TGGTGGAACA ACCAATTAAA
GTCGGCGATT TCATTGAAGT GGATGGACTG CTGGGAACGG TCGAAAAAAT CTCAATTCGA
TCTACGGTGC TGCGAACCAA CGATAACCTC TGTGTGATCG TTCCCAACAA TCGCTTTCTA
GAAAGGAATG TGGTTAATTG GAGCTATGCC AACCCGCAAA GCCGAATCCA CCTGCCCATT
GGGGTTGCCT TTGGCAGTGA CACCGTTCTG GTCACCGAAG CATTACTGGC GGCGGCCCGG
CAGGATGCCC GCGTGTTGAG TCACCCCGCC CCCAGTGTTT GGTTCAAGCG GTTTGGGGAT
AGTGCCTACG AATTTGAATT GCTGGTCTGG ATTGACGAGC CGAAGGACTT TGAGCCGATC
AAAAGCTCCC TTAACTTTCT GGTGGAACAG GAATTGAGTT ATCGCGGCAT TGAAATTCCC
TTTCCCCAGC GGGAGTTGCG GGTGCGGCAC ACGGAAGAAT TACGCTTACT GTTCAACCAG
CCCACCTCAC CAGCGCCCAC CTCACCCCAG CGCCCCTCTC AGCCCCCCAT CCCTCCCCCC
CAGGCGGTGC AGAGTTCTTT TTCCGCCCCC GGCCAGTTTG CCCAGGATCA AACGCTACGG
GTATTGCTGC GAAAAGTGGC TTATTTTGCC AACTGCTCTG ATGCTGAATT GCGAGTTTTA
ATTGAACGCG GCTATCAGAA ATTCTTTCGT TCTGGCCAGG TCATCTTTCG GGCTAACCAA
CCGGGGGATA CCTTCTACAT TATTCTCTCC GGTTCTGTTG AAGTTTTATC GGAAGGGCAA
TGGTCGCCGA ATCAGGCCGA GACCCCTCCC CTGGCTGTGA GTATTGACCC CAAAGCAACC
TTTATTCAGG TGGAAAATCA GGTGCTAGCC ACCCTGAGCA AAGGGGACTT TTTTGGTGAA
ATTTCGCTGC TAACGGGTGC TCCCCGATCG GCAACGGTGC GGGCGGTCGA GGATACGATT
TTGTTTGTCG TCGATCGCAA CGCCCTGCAA AAATTGCTCC AGGAATATCA GGAACTGGCC
GAACGAATCG CGATCGAACT GGCCCAACGC CAGCAGGTGT TACGGGAACT GGGCTTACTG
AACCAGGAGG ATGAGAGCAA TCCTGCCGAT AAAACCCCCT TGCAGCGTAT CCGCCAGCGT
CTCCAAACCC TGTTTAGCCT CTCCGATCGT CCAGGATGGC CAGGTCACGC CTGA
|
|---|
| Protein sequence | MVGILLQPQS SPFPLLFLAA VSPPLLPALG VFSLIIILMA VTIGDRLIVR GMNRFRVWLT
PWFKSQPSPW LELSWSLLQW GLRLGLWLLG VIGVLLLPAS NPLQRWLLLT FTPVVNRLTS
LLVTPLFTLG KATITLTSLF TLIVVSLALL LLSRWLRNWI KQRVLTRLGL DRGNQEAIAG
VIGYLFTALG IIIVLQTIGI DLSSLAVLAG VLGIGLGFAF QQLASNFISG LTLLVEQPIK
VGDFIEVDGL LGTVEKISIR STVLRTNDNL CVIVPNNRFL ERNVVNWSYA NPQSRIHLPI
GVAFGSDTVL VTEALLAAAR QDARVLSHPA PSVWFKRFGD SAYEFELLVW IDEPKDFEPI
KSSLNFLVEQ ELSYRGIEIP FPQRELRVRH TEELRLLFNQ PTSPAPTSPQ RPSQPPIPPP
QAVQSSFSAP GQFAQDQTLR VLLRKVAYFA NCSDAELRVL IERGYQKFFR SGQVIFRANQ
PGDTFYIILS GSVEVLSEGQ WSPNQAETPP LAVSIDPKAT FIQVENQVLA TLSKGDFFGE
ISLLTGAPRS ATVRAVEDTI LFVVDRNALQ KLLQEYQELA ERIAIELAQR QQVLRELGLL
NQEDESNPAD KTPLQRIRQR LQTLFSLSDR PGWPGHA
|
|---|
| |