Gene Cyan7425_5040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan7425_5040 
Symbol 
ID7290993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7425 
KingdomBacteria 
Replicon accessionNC_011884 
Strand
Start bp5131095 
End bp5131877 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content57% 
IMG OID643588000 
ProducttRNA/rRNA methyltransferase (SpoU) 
Protein accessionYP_002485698 
Protein GI220910387 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACCA GTTTGCAAAA TCCTCTGATC AAGCAGATGC GTAAGCTGCA TCAGGGGAAG 
TATCGCCGTG CTCAACAGCA GTTTCTTCTG GAAGGTACCC ATTTACTGCT GGAGGCGGTA
GAGACAGGTT ACCCCCTGGA GGTGATTTGT TTTACCCCCC AGTGGCAGGC GAAACAAGCC
CCAGACTGGC TGGCACAACT AGAGCAATTG ACTCGCCTGG AAGTCGTGAG TGAACAGGTG
TTAGCAGCGA TCGCCACAAC GGTGAACCCC GATGGCGTGG TTGCCCTGGC CCCCTTCCAA
CCCCGTCCGC CCCTGGAGAT TCATCACCTG GGTCTGGCGG TGGAAACCCT TCAAGATCCG
GGCAATCTCG GTACCATGAT TCGTACGGCA GCAGCGGCAG GAGCAGAAGG GGTACTGCTG
AGTTCAGACA GTGTGGAACT GGAAAATCCG AAAGTGTTAA GAGCAACGGC GGGGCAATGG
TTTCGGCTTC CCCTCAGTGT TGCTGAAGAT TTCCAGGCAG AACTGCAGCA TTATCGTCAG
CAGGGCATCC AGGTGGTGGC CACCCTCCCC CAGGCTCAGT CCAACTACTG GGATGTGGAT
CTCACCTGCC CCACCCTCTT TCTGCTCGGA AATGAAGGCG CTGGGTTATC TGCCTCCGTG
GTTGCTTTAG CCGATCGACA GGTGAAAATT CCCTTACAAC CGGGGGTGGA ATCCCTCAAT
GTGGCGATCG CAGCGGCCCT ACTGCTCTAC GAGGCCCAAC GGCAACGCCA GTCTCGAGCA
TGA
 
Protein sequence
MLTSLQNPLI KQMRKLHQGK YRRAQQQFLL EGTHLLLEAV ETGYPLEVIC FTPQWQAKQA 
PDWLAQLEQL TRLEVVSEQV LAAIATTVNP DGVVALAPFQ PRPPLEIHHL GLAVETLQDP
GNLGTMIRTA AAAGAEGVLL SSDSVELENP KVLRATAGQW FRLPLSVAED FQAELQHYRQ
QGIQVVATLP QAQSNYWDVD LTCPTLFLLG NEGAGLSASV VALADRQVKI PLQPGVESLN
VAIAAALLLY EAQRQRQSRA