Gene Cyan7425_5035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan7425_5035 
Symbol 
ID7290988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7425 
KingdomBacteria 
Replicon accessionNC_011884 
Strand
Start bp5123537 
End bp5125999 
Gene Length2463 bp 
Protein Length820 aa 
Translation table11 
GC content49% 
IMG OID643587995 
Productdiguanylate cyclase/phosphodiesterase with extracellular sensor 
Protein accessionYP_002485693 
Protein GI220910382 
COG category[T] Signal transduction mechanisms 
COG ID[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACATTAC GCAAGAAAGC CATATGGGTA ATTAGTCTTA CCTTCCTGGT TATCTTTCTG 
GTTCTCTACG CGATCGGTAC AACGATTGTG AGAGAAGGCT TTGCCAGAGT AGAGCAGCAG
ATGGTATCTG GCGATGTCCA GCGGGTGTTG CAAGCTCTGA ACGCCGACTT AAACCATTTA
GACTCCACAG CTGCAGATTG GGCGATGTGG GACGAAACCT ATGCCTTTAT TCAGAATCTC
GATCCACAGT ACATTCAAAC CAACTTATCT GCTCAATCGC TCGTAAATCT GCGCCTGAAT
TTGATTTTGT TCCTTGAGGC GGGGGGCAAA CTGGCTTATG CCCGTAGCGT TGATTTAAAT
ACAGGCCAGA TAGTGCCTCT CAATCCAACT TTAGTTAATG CTGTTAGCAA TAACCCCAGG
CTCCTGCAAC CACGATCCCA AGACAGAAGA CAAGGCTTAT TAATATTGCC TGACTCCACT
TTGCTGCTGG CTGCCCGGCC AATTCTGACC AGCCAACGGC AAGGGCCTGT GCGAGGAACA
TTGATTCTCG GTCAATATCT GGATCAAGAG AAAATTACTG AGTTGTCCGA AAGAACAAAG
CAATCGCCGA TTTTGTTTTA TCCCTATCAT GCTGCCCATC TGCCGGAAGA GGTGCGTCGA
ATACAAACCA GCCTCACTCC AGCTCACCCC ATTGTGGTGC GGCCATTAAG CGAAACTTTA
GTGGCTGGCT ATGGGCTAAT CATGGACATT TATGAACAGC CAGGGCTATT GCTACAGATC
AATCTGCCCA GGTCAGTTCA TCAGCAGGGA GAGTTAAGCT TGAGAGTTTT TCTGGGTGTC
CTGTTGCTTA CAGGTCTAGT TTGCACGATC GCCACCTGGC TGCTGATGGA AAAGTTAGTC
TTAACCCGCC TGGGACATCT GACCGCTGGG GTGCAAAAAA TTCAATTTTC TCAAAATCCA
AGCTGGCGGT TGAAGGTAAT AGGAGGAGAT GAGTTAGCCC GTTTAGCCGA TGGCATCAAC
CAAATGTTGG CCGCCCTGGA AGCCTCTCAA CAAGAACTGC AGTACACTCA GCAACAGTAT
CATTGGCAGG CTAACCACGA TCCTTTAACA GAACTCCCCA ATCGACGCAG TTTTGAACAA
ACCCTACGAG CGAGTTTTAC CCAGTCCCAG CGCACCCAGC AGGAACATGT TCTTTGTTTG
GTTGACCTGG ACCGCTTCAA ACTCGTGAAT GATACCAGTG GCCATGCCGC GGGAGATGAA
TTGCTCAAAC AGATCAGTTT GCTATTGAAA ACACAAATTC GGCAAACAGA TGTTGTCGCC
CGCTTAGGGG GAGATGAATT TGGCATTATT TTCTACCATT GTTCTCTTGA TGCTGCCCAG
CGACTTGCCC AAAAGCTTCA GAGCAGTCTG GCAACCTTTC GCTTTGTCTG GCAGGATAGG
GTGTTTACCG TGGGAGCTAG CCTTGGCTTG GCCCAAATTT CTGCCCACGT TGCTGACCTG
GCGGAGGTGA TGACGGCAGC GGATCTGGCC TGCTATACCG CGAAGAAGCA GGGGGGAAAC
CGGGTTCATA TCCATAGAAT TGGTAGCCAG GCGTTGGCAA GCCAATTGGG TGAGGTTCAC
TGGGCTGTCC AACTGCGCCA GGCGATCGAG AACAACCGGT TTTGCCTTTA TTCCCAGCCC
ATTGTCCCCA TCAACCGGTG TTCTTGCCAA ACAGTCTCTG GGACTCTAGA CCCGACCGTT
GAGCCAAGAG AGGCAACACC AATCGGAGCC ACAAACCCTG CAGCCTGCAC TTCCCAATCA
CAGCCCTATC TTTGCCAGGA AGTGCTTCTC CATCTTTATG ACGAAACCAA TCAGGTAATT
GATCCAAACG TTTTTCTGCC GATCGCTGAA CAGTATGGGC TGATCACGGT GATCGATCGC
TGGGCGATTC ACAACCTGTT TGCCTATATT CAAGCCCAGC ACTATCCTGC CGCAACCCTC
GATTCTGCTA GAGGCTACCG CTATGCCATT AACCTATCTG GCAGGACGCT TGATGATGCC
TCATTTGCCG ATTTTTTGCT AGAGCAACTG GCAGCTTATC AAGTTCCACC AGCGGCAATT
TGCTTCGAAA TTACGGAAAC AGCGGCAATT GCCAATCTGA AACTAGCCAT GCCCTTCATC
CAAACCCTCA AAGCTGCGGG TTGCCTTTTT GCTTTAGATG ACTTTGGCGG CGGCATGTCT
TCCTTTGCGT ACTTGAAGAA CTTACCTGTA GACTATCTAA AAATTGATGG CACTTTGATC
AAGGACTTAA GCAACAATCC AGTTAACTAT TACATTGTCC AGGCCATTAA TGACATTGCC
CATACCATGG GGATTCAAAC CATTGCTGAG GGTGTGGATA GCCTGGATAC CCTGTCTAGC
GTCAGTCAGA TTGGTATAGA CTTTGCCCAG GGTCACTACA TTGCCCAACC TGTGCCGCTC
TAA
 
Protein sequence
MTLRKKAIWV ISLTFLVIFL VLYAIGTTIV REGFARVEQQ MVSGDVQRVL QALNADLNHL 
DSTAADWAMW DETYAFIQNL DPQYIQTNLS AQSLVNLRLN LILFLEAGGK LAYARSVDLN
TGQIVPLNPT LVNAVSNNPR LLQPRSQDRR QGLLILPDST LLLAARPILT SQRQGPVRGT
LILGQYLDQE KITELSERTK QSPILFYPYH AAHLPEEVRR IQTSLTPAHP IVVRPLSETL
VAGYGLIMDI YEQPGLLLQI NLPRSVHQQG ELSLRVFLGV LLLTGLVCTI ATWLLMEKLV
LTRLGHLTAG VQKIQFSQNP SWRLKVIGGD ELARLADGIN QMLAALEASQ QELQYTQQQY
HWQANHDPLT ELPNRRSFEQ TLRASFTQSQ RTQQEHVLCL VDLDRFKLVN DTSGHAAGDE
LLKQISLLLK TQIRQTDVVA RLGGDEFGII FYHCSLDAAQ RLAQKLQSSL ATFRFVWQDR
VFTVGASLGL AQISAHVADL AEVMTAADLA CYTAKKQGGN RVHIHRIGSQ ALASQLGEVH
WAVQLRQAIE NNRFCLYSQP IVPINRCSCQ TVSGTLDPTV EPREATPIGA TNPAACTSQS
QPYLCQEVLL HLYDETNQVI DPNVFLPIAE QYGLITVIDR WAIHNLFAYI QAQHYPAATL
DSARGYRYAI NLSGRTLDDA SFADFLLEQL AAYQVPPAAI CFEITETAAI ANLKLAMPFI
QTLKAAGCLF ALDDFGGGMS SFAYLKNLPV DYLKIDGTLI KDLSNNPVNY YIVQAINDIA
HTMGIQTIAE GVDSLDTLSS VSQIGIDFAQ GHYIAQPVPL