| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_4970 |
|---|
| Symbol | |
|---|
| ID | 7290923 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | + |
|---|
| Start bp | 5053447 |
|---|
| End bp | 5053989 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643587931 |
|---|
| Product | 16S rRNA processing protein RimM |
|---|
| Protein accession | YP_002485629 |
|---|
| Protein GI | 220910318 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
|---|
| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGAAC CGCAAGAGAG TGAATGGGTA GAAATTGGCA CGATCGTCGC AGCCCAGGGG
TTAGGAGGAG AAGTTCGGGT CAAGCCGGAT TCTGATTTTC CTGAACGGTT TATTCGCCCT
GGACAACGGT GGCTGCAGCG CTCCCCCCAA TCCCTGCCCG AACCGATTCG GCTACTGCAA
GGACGGCTGT TACCACGCAA AGGAATCTAT ATTCTCAAAC TGGCGGGGAT TGAAAACCGC
ACCCAGGCTG AAGCCTTAAA AGGCAGTCTG TTGCTGGTTC CCCACAGCGA TCGACCAAAG
CTGGCACCGG GAGAATTTTA TCTACAGGAT TTGCTGGGCT TAGAGGTGTT TGAACAGGGC
AACCAAACCT ATGTGGGGGT GATCACAGGG GTGATTCCCG CCGGTAATGA TCTCTTAGAA
GTCCAACCGC CTCAAGCAGA TCGCCCTCCG GTTCTGATCC CTTTAGTCCG AGAGATTGTC
CCTTTGATCG ATCTAGGGGC ACAGCGGGTA GAAATTAATC CTCCCCCAGG TTTGTTGTCC
TGA
|
|---|
| Protein sequence | MVEPQESEWV EIGTIVAAQG LGGEVRVKPD SDFPERFIRP GQRWLQRSPQ SLPEPIRLLQ
GRLLPRKGIY ILKLAGIENR TQAEALKGSL LLVPHSDRPK LAPGEFYLQD LLGLEVFEQG
NQTYVGVITG VIPAGNDLLE VQPPQADRPP VLIPLVREIV PLIDLGAQRV EINPPPGLLS
|
|---|
| |