| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_4871 |
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| Symbol | |
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| ID | 7290825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Cyanothece sp. PCC 7425 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011884 |
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| Strand | + |
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| Start bp | 4957521 |
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| End bp | 4959431 |
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| Gene Length | 1911 bp |
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| Protein Length | 636 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643587836 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_002485534 |
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| Protein GI | 220910223 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGAAC AACTCAGGCA GAACCGTAGT GTATTCCTGG AGCAGAACCA GGAAGAATTT
GCTGAGCTGC TCACATTTAT TGATTTTGCT CAGGGATTGA CGATCGGCTT TATTGAAATT
AATCAGGAGC CGGATAAAGC CACCCTGGTT GCAGCCTTAC GGGAGCATCT TGCTGAAAGT
GACGTGGAAT TAGCAGTGCT GAACTTTTCT CAGGAAAAGA ACCTGCGTTT TCTGCGGGAG
GCATTGATTG AACGAATTAA CCGGATTAAA ACTCGACCAA CGGATCGCAA ATTAGTTTTA
CTAATTCAGG GTTTAGAAGT GGCCATTGGC TCCGATGGTG TGGGTGCTTA TCCCCCGATT
TTGCAAGACT TGAATTTTGT TCGGGATGCC TATCGTCAGA GTGTTGCGTA TCCTTTGTTA
TTTGTACTGC CCGATTATGC CATTACCCGA ATCAGTAAGT ATGCACCGGA TTTCTGGGCC
TGGCAGTCGG GAGTGTTCAG ATTTAAGACA TCACAGCAAA GCCTTGAGCA ATTAAAAGTT
GAAGCGTTCG ATCGTCCTTT AGCTCATATT GCCTCTACAG AAAATGAAGC TCAAATTGAG
CAACTTAAAC AATTGCTGAT GGAACTGCGT CCGTCTGGGC AGACGATTCT TCCTCAGAAT
CTAAAGCCAT GTAGCGAACT CTATTACAAA ATTGGCTCTG CTTACCTGAC TCAACAGCAA
CCGGAAAAAG CAAGAGACTA TCTGCAAGAA GGCTTGAGAC TGTTGGAGCG TAATCGTGAT
TCAGATCTCT ATCAAAGCCT ATATCGCAGG TTAGGTAATG TTTATGAGAA AATGCGGCAA
TTTGACCAGG CAATTACTGC TTACGAAGAA GCTCTAAAAA TAGCACGATC CCAGAATCAT
TCTGAGATGG TTAAAGTAAT ATTGAGCGAT TTAGCTGAAG TAGCATTAGA GCAGCGAAAA
TTTGATCAGG CTAGAATGTT TTATCAGCAA AGTTTAGAGA TTGCTAAATC TCAGAAAGAT
TTCTTTGCCC AAGCCAGTAC ATACCATAAC TTAGGCAACG TAGCCCTAGA AATGCGGGAG
CATGGGCAGG CAAAAGATTA CTATCAAAAA GCCTTACAAA TCAAGATCGA CTATGACGAT
CGCTACACCC AAGCTAGCAC TTACCATCAA TTGGGCAATG TAGCTGTGGA AATGCGGGAG
TATGAGCAGG CAATAAATTA CTATCAAAAA GCCTTACAAA TCAAGATCGA CTACGGCGAT
CGTTACTCAC AAGGTAGTAC TTACCATCAA TTAGGAATTG TAGTTCAGAA AATACTAAAG
TATGAGCAAG CCAAACATTA CTATCAACAG GCTCTGAAAA TCTTCAATGA GTACAACGAT
CGCTTTTCTC AAGCCCAAAC TGGCTATCAA TTTGGCAATT TACTTCTAGA GTTACAGGAC
TATGAGCAGG CTAAAAAGTA CTATCAACAG GCTCTACAAA TTTTTATTGA ATATAGCGAT
TACTTCTTCC AAGCTCGTGC CTACCAAAAT TTAGGTATTA TAGCCCTAAA ATTACAGGAC
TATGAGCAGG CTAAAAAGTA CTATCAACAG GCTCTACAAA TCTTCAGCAA GTACAACGAT
CGCTATTCTC AAGCTAGCGT CTACGGTCAA TTAGGTGTAT TAACTGAAAG CATGGGCGAA
TATCAGGGGG CGAAGGTGTA TTATCAACAG GCTCTACAAA TCTTCAGCAA GTACAACGAT
CGCTATTCTC AAGCTCCTAT CTATAATCAA TTAGGACTGT TAACCGAGGC AGAGGGAAAT
CCGGCAGAGG CAAGAAACTA TTTACAACAG GCGTTAGAAA TTTGTTTTGA ATTTGGAGAT
AATCGTGGTA TCACGTCAGT GCAGGAGCAG ATAGATCGAC TTTCTAGCTA A
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| Protein sequence | MLEQLRQNRS VFLEQNQEEF AELLTFIDFA QGLTIGFIEI NQEPDKATLV AALREHLAES
DVELAVLNFS QEKNLRFLRE ALIERINRIK TRPTDRKLVL LIQGLEVAIG SDGVGAYPPI
LQDLNFVRDA YRQSVAYPLL FVLPDYAITR ISKYAPDFWA WQSGVFRFKT SQQSLEQLKV
EAFDRPLAHI ASTENEAQIE QLKQLLMELR PSGQTILPQN LKPCSELYYK IGSAYLTQQQ
PEKARDYLQE GLRLLERNRD SDLYQSLYRR LGNVYEKMRQ FDQAITAYEE ALKIARSQNH
SEMVKVILSD LAEVALEQRK FDQARMFYQQ SLEIAKSQKD FFAQASTYHN LGNVALEMRE
HGQAKDYYQK ALQIKIDYDD RYTQASTYHQ LGNVAVEMRE YEQAINYYQK ALQIKIDYGD
RYSQGSTYHQ LGIVVQKILK YEQAKHYYQQ ALKIFNEYND RFSQAQTGYQ FGNLLLELQD
YEQAKKYYQQ ALQIFIEYSD YFFQARAYQN LGIIALKLQD YEQAKKYYQQ ALQIFSKYND
RYSQASVYGQ LGVLTESMGE YQGAKVYYQQ ALQIFSKYND RYSQAPIYNQ LGLLTEAEGN
PAEARNYLQQ ALEICFEFGD NRGITSVQEQ IDRLSS
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