| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_4854 |
|---|
| Symbol | trmD |
|---|
| ID | 7290808 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | + |
|---|
| Start bp | 4938121 |
|---|
| End bp | 4938843 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 643587820 |
|---|
| Product | tRNA (guanine-N(1)-)-methyltransferase |
|---|
| Protein accession | YP_002485518 |
|---|
| Protein GI | 220910207 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
|---|
| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGCTTTG ATGTTGTAAC ACTTTTCCCA GATTTTTTTA CCTCTCCCCT GGCCAGCGGC
TTGCTGGGTA AAGCTCTGGC CAAACAAATT GCTGAAGTTT ACCTGCTTAA CCCACGGGAT
TTTACAACGG ATAAACACCA TCGGGTGGAC GACGAATCCT ATGGCGGTGG GGTGGGGATG
GTGTTGAAAC CAGAACCGAT CTTTGCAGCG GTGGAATCCT TACCCGTTTT ACCCCGGCGA
GAAGTAATTT TGATGTCTCC CCAGGGAGAG CGGCTGGATC AAGCCTTACT GCAGAGCCTG
GCTGACAATT TTGATCAGCT GGTGGTCATC TGTGGGCACT ACGAGGGCGT AGATGAACGG
GTGGTGGACC ATCTGGTCAC ACGGGAAATT TCCCTGGGGG ATTTTGTACT GACCTGTGGT
GAAATTCCGG CCCTGACCCT GCTCAATGGG GTAATCCGCT TGCTGCCCGG TACAGTGGGT
AAGGCTGAAT CGCTGCAGAA CGAAAGTTTT ATCGATGGTT TACTGGACTT TCCCCATTAC
ACTCGTCCGG CAGACTTTCG GGGTTGGCCG GTTCCCCAGG TTTTACGCTC TGGCCATCAT
GCTGAGGTAG ATCGCTGGCG ACGTACTCAA CAAATTCAAC GCACCCGCGA TCGACGGCCC
GATCTGTACC AGCGCTGGCT CAACTCCCTG CCACCGGATT CACTTCAGGA TTTTACAGTT
TGA
|
|---|
| Protein sequence | MRFDVVTLFP DFFTSPLASG LLGKALAKQI AEVYLLNPRD FTTDKHHRVD DESYGGGVGM
VLKPEPIFAA VESLPVLPRR EVILMSPQGE RLDQALLQSL ADNFDQLVVI CGHYEGVDER
VVDHLVTREI SLGDFVLTCG EIPALTLLNG VIRLLPGTVG KAESLQNESF IDGLLDFPHY
TRPADFRGWP VPQVLRSGHH AEVDRWRRTQ QIQRTRDRRP DLYQRWLNSL PPDSLQDFTV
|
|---|
| |