Gene Cyan7425_4840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan7425_4840 
Symbol 
ID7290794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7425 
KingdomBacteria 
Replicon accessionNC_011884 
Strand
Start bp4921544 
End bp4922515 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content53% 
IMG OID643587806 
Productsolanesyl diphosphate synthase 
Protein accessionYP_002485504 
Protein GI220910193 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0142] Geranylgeranyl pyrophosphate synthase 
TIGRFAM ID[TIGR02749] solanesyl diphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.854257 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCAG TCACCTCCCT TTTTTCACCC GTAGAAGCAG ATCTGAGGCT GCTGACGGAG 
AACCTGAAAA AACTGATCGG GGCTCGGCAT CCGGTCCTTT ATGCGGCGGC AGAACATTTG
TTTGGGGCTG AGGGTAAACG GATTCGGCCG GCGATCGTCC TCCTACTGGC CAGGGCAATT
TCTCCAAGCC AAGAAATTTC TTCTCGCCAC CGCCGCCTGG CCGAAATCAC CGAAATGATC
CATACCGCCA GTCTTTTCCA TGACGATGTG GTGGATCAGT CCGACCTGCG CCGGGGCCTA
CCCACTGTCC ACAGTCTGTT TGGTAATCGG ATCGCCATTC AAGCGGGAGA TTTTCTCTTT
GCTCAAGCCT CCTGGTATCT GGCAGATCTG GATAATCTTA CGGTGGTCAA GTTGCTCTCC
CAGGTGATTA AAGACTTTGC CGAAGGGGAG ATCCAGCAGG GATTTAACCG CTTTGATACC
AGCCTTACTA TGGCGGCTTA TCTGGATAAA ACTTATTACA AAACGGCTTC CCTGATTGCC
AACAGTAGCA AAGCCGTAGG GGTTCTGAGT GGGATTTCCG CCCAGAGCAG CCAATCCCTC
TACGAGTATG GACGACACGT GGGTCTGGCC TTTCAAATCG TCGATGATAT TCTCGACTTT
ACTCGCTCCA CCGATGATCT GGGGAAGCCT GCTGGCTCTG ACCTCAAGGA TGGTACCCTG
ACCGCCCCTG CCCTCTATGC TCTGGAAGAA CAACCCTATC TGAAAGTATT AATTGAGCGG
GAATTCCGTG AAACGGGTGA CCTGGAAGCG GCGATCGCCC TGGTTCAAAA TAGCCGTGGC
ATTGAGCGGG CCAGACAACT GGCAGAGAAG TACGCCCATA CCGCAGTACA ATACCTGGCA
GACCTGCCGG AATCCGATGC TCAGCAAGCT TTAACCCATC TGACCGAATA CATTCTCAAG
CGATTGCATT AA
 
Protein sequence
MTSVTSLFSP VEADLRLLTE NLKKLIGARH PVLYAAAEHL FGAEGKRIRP AIVLLLARAI 
SPSQEISSRH RRLAEITEMI HTASLFHDDV VDQSDLRRGL PTVHSLFGNR IAIQAGDFLF
AQASWYLADL DNLTVVKLLS QVIKDFAEGE IQQGFNRFDT SLTMAAYLDK TYYKTASLIA
NSSKAVGVLS GISAQSSQSL YEYGRHVGLA FQIVDDILDF TRSTDDLGKP AGSDLKDGTL
TAPALYALEE QPYLKVLIER EFRETGDLEA AIALVQNSRG IERARQLAEK YAHTAVQYLA
DLPESDAQQA LTHLTEYILK RLH