| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_4779 |
|---|
| Symbol | |
|---|
| ID | 7290733 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | - |
|---|
| Start bp | 4865543 |
|---|
| End bp | 4866940 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 643587747 |
|---|
| Product | oxygen-independent coproporphyrinogen III oxidase |
|---|
| Protein accession | YP_002485445 |
|---|
| Protein GI | 220910134 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
|---|
| TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0897448 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTATTG TGCTGCCCAC CGTTCAATTT GACTCTGCTC TGCTGAAAAA GTACGATCAG
CCTCTGCCCC GCTATACCAG TTATCCCCCC GCCACTGAGC TGAAGCCGGA GTTTGAGGAA
GTGGATTTCC GGGCCGCGAT CGCCGTCAGC AACTACAAGA AAACCCCCCT CTCGCTTTAC
TGTCACATCC CCTTTTGTGA AACCGCCTGT TATTTCTGTG GTTGCAACAC GGTGATCACC
CAGCGTAAAG GCATGGTCGA TCCCTACCTG GATTATTTAG CCCGCAATAT CGGTCAGTTA
ACCGAGCTGG TTGATCCGAA TCGGCGGGTG CAGCAGATGC ACTGGGGCGG TGGCACTCCC
AACTATCTCA ACCTGGGTCA GGTGGAACAC CTCTGGAGGA CGATCGCTCA GCGGTTTAAG
TTTGCCGATC AAGCTGAAAT TTCGATTGAA GTCAATCCTC GCTATCTGGA TCGCAACTAT
GTGCTGGGAC TTAAAGCCAT AGGATTTAAC CGGATCAGCT TTGGCATTCA GGACTTCAAC
CCGCAGGTGC AGACCGCAGT CAATCGGGTG CAGCCGGAAG CTTTGTTATT TAATGTGATG
GACTGGATTC GCGAAGCTGG CTTTGACAGT GTGAATGTGG ATCTGATCTA CGGCTTACCT
TTCCAAACCT TAGAAACCTT CCGGGAAACG ATCGCCAAAA CGATCGACCT GAATCCCGAT
CGGATTGCCG TGTTCAACTT TGCCTATGTG CCCTGGTTAA AGCCGGTTCA ACGCAAAATT
TCCCAGGAAG ATCTCCCCCC GCCGGCTGAA AAACTGGAAA TCCTGCGGAT GGCGATCGCA
GAGTTGACCC ACAACGGCTA TCAGTACATC GGTATGGATC ACTTTGCCAA ACCCGAAGAT
GAACTGGCCG TGGCTCAGCG GCAGGGCAAA CTGCACCGTA ATTTTCAAGG CTATACGACT
CAGCCGGAAT CTGATTTACT GGGCTTTGGC ATGACCTCGA TCAGTATGCT CCACGATGTC
TATGTCCAGA ACCATAAGAA ACTGAGCGAT TTTTATCGGG CGATCGATGC CGGTCAACTG
CCGATCGAAC GGGGGGTCAG TCTGAATCAG GACGATGTGG TGCGGCGGAC AGTGATCATG
GAATTGATGT GCCAGTTCCA ACTGTCTAAA CCAGCGCTGG AAGAGAAGTA TCACCTCAGC
TTTGATTGTG ATTTTGATGA TTACTTCTTC GCCGAGCAAT CTGAACTCAG CCGTTTGGAA
GCCGATGGGT TGATTGAACA CTCTCCCAAC CAGATTCAGG TCACCCCCGC TGGCCGCTTA
CTGATCCGCA ACATTGCCTC CGTCTTTGAT GCCTACCTGA AGCGCAAAAT CACCGCCAAT
TTCTCTAAAT CGATTTAG
|
|---|
| Protein sequence | MSIVLPTVQF DSALLKKYDQ PLPRYTSYPP ATELKPEFEE VDFRAAIAVS NYKKTPLSLY
CHIPFCETAC YFCGCNTVIT QRKGMVDPYL DYLARNIGQL TELVDPNRRV QQMHWGGGTP
NYLNLGQVEH LWRTIAQRFK FADQAEISIE VNPRYLDRNY VLGLKAIGFN RISFGIQDFN
PQVQTAVNRV QPEALLFNVM DWIREAGFDS VNVDLIYGLP FQTLETFRET IAKTIDLNPD
RIAVFNFAYV PWLKPVQRKI SQEDLPPPAE KLEILRMAIA ELTHNGYQYI GMDHFAKPED
ELAVAQRQGK LHRNFQGYTT QPESDLLGFG MTSISMLHDV YVQNHKKLSD FYRAIDAGQL
PIERGVSLNQ DDVVRRTVIM ELMCQFQLSK PALEEKYHLS FDCDFDDYFF AEQSELSRLE
ADGLIEHSPN QIQVTPAGRL LIRNIASVFD AYLKRKITAN FSKSI
|
|---|
| |