Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan7425_4670 |
Symbol | psaB |
ID | 7290623 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7425 |
Kingdom | Bacteria |
Replicon accession | NC_011884 |
Strand | - |
Start bp | 4753856 |
End bp | 4756084 |
Gene Length | 2229 bp |
Protein Length | 742 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643587638 |
Product | photosystem I P700 chlorophyll a apoprotein A2 |
Protein accession | YP_002485337 |
Protein GI | 220910026 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01336] photosystem I core protein PsaB |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.497119 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.71822 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACTA GATTCCCTAA ATTTAGCCAG GATCTAGCGC AGGACCCGAC CACTCGTCGG ATCTGGTATG CGATTGCCAC GGCCCACGAC TTTGAAAGCC ATGATGGCAT GACCGAGGAA AATCTTTATC AAAAGATTTT TGCCTCCCAC TTCGGTCATC TGGCAATCAT CTTCCTGTGG ACCTCCGGCA GTCTCTTCCA CGTCGCCTGG CAAGGAAACT TTGAACAGTG GATCAAAGAT CCGCTCAATA TCCGCCCGAT CGCCCACGCG ATTTGGGATC CCCAATTTGG CAAACCCGCC GTTGATGCCT TCACCCAAGC GGGTGCTTCC AGCCCGGTAG ATATTGCCTA CTCTGGCGTC TACCACTGGT GGTACACCAT TGGCATGCGG ACCAACAGTG ACCTGTACAT GGGAGCTATC ACCCTGCTCC TGTTTGCCGC TGTGTTTCTG TTTGCTGGTT GGCTGCACTT ACAACCCAAA TTCCGCCCCA GCCTGGCCTG GTTCAAGAAT GCTGAATCCC GTCTCAACCA CCACTTGGCT GGTCTGTTTG GGGTGAGCTC CCTGGCCTGG GCTGGTCACC TGATTCACGT TGCTATTCCT GAAGCGCGTG GACAGCATGT GGGCTGGGAT AACTTCCTTA GCACCATGCC TCACCCAGCG GGACTGGCCC CCTTCTTTAC CGGTAACTGG GGTGTTTATG CCCAGAATCC CGATACGGCT GGCCATGTGT TTGGTACGTC TGAAGGTGCT GGGACAGCTA TTCTCACCTT CCTGGGTGGT TTCCATCCTC AGACCGAATC CCTCTGGTTG ACAGACATTG CCCATCACCA TTTGGCAATT GCCGTGATCT TCATCATTGC TGGCCATATG TACCGTACCA ACTTTGGTAT TGGTCACAGC ATGAAGGAGA TCATGAATGC TCATAATCCT CCTCAGGGAA CTCCCTTTGG TGGAATGTTG GGTGCCGGTC ACCAGGGTAT GTACGATACC TACAACAACT CTCTGCACTT CCAACTCGGT TGGCACTTGG CTTGTTTAGG GGTTGTGACC TCTCTGGTCG CTCAGCACAT GTACTCGTTA CCTCCTTACG CTTTTATTGC GCAGGATCAC ACCACGATGG CTGCCCTTTA CACGCACCAT CAGTACATTG CTGGCTTCCT CATGGTGGGT GCATTTGCTC ACGGTGCCAT CTTCTTGGTT CGGGACTACG ATCCGGCCGC TAACAAGAAC AACGTATTGG CTCGGGTGCT GGAGCACAAA GAAGCCATCA TCTCTCACTT GAGCTGGGTG TCTCTCTTCC TGGGCTTCCA CACTCTGGGA CTTTACGTTC ACAACGATGT GGTGGTTGCC TTTGGTACCC CCGAAAAGCA AATCTTGATT GAGCCGGTGT TCGCCCAGTT CATTCAGGCT GCCCACGGTA AGGTGCTCTA TGGGTTTGAT ACGCTGCTCT CCAACCCTGA CAGCATCGCC ACGACTGCCT GGCCCAACTA CGGTAACGTT TGGCTACCCG GTTGGTTAGA TGCGATTAAC AGTGGAACCA ACTCTCTGTT CCTGACCATC GGTCCTGGCG ACTTCCTGGT TCACCATGCG ATCGCCCTCG GTCTGCACAC CACCACCCTG ATTCTGGTCA AGGGTGCCCT GGATGCCCGT GGGTCTAAGC TGATGCCCGA CAAGAAAGAC TTCGGCTATG CCTTCCCCTG CGATGGCCCC GGCCGTGGCG GTACCTGCGA CATCTCTGGT TGGGATGCCT TCTACCTGTC CATGTTCTGG ATGCTCAACA CCATCGGCTG GGTAACTTTC TACTGGCACT GGAAGCATCT GGGTATCTGG GAAGGCAACG TTGCGCAATT TAACGAGTCT TCCACCTACC TGATGGGTTG GCTGCGGGAT TATCTCTGGC TCTATTCCGG TCCGTTAATC AACGGCTATA ACCCCTTCGG CATGAACAAT CTGGCCGTCT GGTCCTGGAT GTTCCTCTTT GGACACCTGG TTTGGGCAAC TGGATTCATG TTCCTGATCT CCTGGAGAGG TTACTGGCAA GAGTTAATCG AAACCCTGGT CTGGGCCCAT GAGCGTACTC CTCTGGCAAA TCTGGTCCGC TGGAAAGATA AGCCCGTTGC TCTCTCGATC GTGCAGGCTC GTCTGGTTGG GTTAGCTCAC TTTACGGTTG GCTACATCGT TACCTACGCT GCCTTCTTGA TCGCCTCGAC TGCAGCGAAG TACGGTTAA
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Protein sequence | MATRFPKFSQ DLAQDPTTRR IWYAIATAHD FESHDGMTEE NLYQKIFASH FGHLAIIFLW TSGSLFHVAW QGNFEQWIKD PLNIRPIAHA IWDPQFGKPA VDAFTQAGAS SPVDIAYSGV YHWWYTIGMR TNSDLYMGAI TLLLFAAVFL FAGWLHLQPK FRPSLAWFKN AESRLNHHLA GLFGVSSLAW AGHLIHVAIP EARGQHVGWD NFLSTMPHPA GLAPFFTGNW GVYAQNPDTA GHVFGTSEGA GTAILTFLGG FHPQTESLWL TDIAHHHLAI AVIFIIAGHM YRTNFGIGHS MKEIMNAHNP PQGTPFGGML GAGHQGMYDT YNNSLHFQLG WHLACLGVVT SLVAQHMYSL PPYAFIAQDH TTMAALYTHH QYIAGFLMVG AFAHGAIFLV RDYDPAANKN NVLARVLEHK EAIISHLSWV SLFLGFHTLG LYVHNDVVVA FGTPEKQILI EPVFAQFIQA AHGKVLYGFD TLLSNPDSIA TTAWPNYGNV WLPGWLDAIN SGTNSLFLTI GPGDFLVHHA IALGLHTTTL ILVKGALDAR GSKLMPDKKD FGYAFPCDGP GRGGTCDISG WDAFYLSMFW MLNTIGWVTF YWHWKHLGIW EGNVAQFNES STYLMGWLRD YLWLYSGPLI NGYNPFGMNN LAVWSWMFLF GHLVWATGFM FLISWRGYWQ ELIETLVWAH ERTPLANLVR WKDKPVALSI VQARLVGLAH FTVGYIVTYA AFLIASTAAK YG
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