| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_4621 |
|---|
| Symbol | |
|---|
| ID | 7290574 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | + |
|---|
| Start bp | 4706468 |
|---|
| End bp | 4708798 |
|---|
| Gene Length | 2331 bp |
|---|
| Protein Length | 776 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 643587591 |
|---|
| Product | UvrD/REP helicase |
|---|
| Protein accession | YP_002485290 |
|---|
| Protein GI | 220909979 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.410908 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTTCTA CCGTGATTTC AGTTGCTGCA GCCGGACTGG ATACCCTGCG TCAGACCCTC
CGACCGGGAC AACGGGAACT GGCGGATTGG CAATCCGGTT CCTTAGCCAT TTCGGCAGTG
CCGGGGGCAG GAAAATCCTA TGGCATGGCT GTGGCTGCCG CGATCGCCGT GGCCCAAAAC
CAACTGGGAC GGAACCGTCA ACTACTGGTT GTCACTTTCA CCCGCTCCGC CGCTGCCAAT
ATCAAGAGCC GAATTCGGGA GCACCTGCGC CTACTGGGCC TGCCTCAGGG TGGTTTTGCT
GTTTTTACGC TACACGGTCT GGCCCTGGCC ATTGCCCGCC AATCTCAGTT CTCCGGGCTA
GATCTGGAAC AAGCCACCCT GATTTCCCCC TACCAGGGCC ATCGCCTGAT CCGCACCTGT
GTCGATCAAT GGATTGCTGC CCATCCCCAC CTCTACCGCC AACTGCTGGA GGGACGCCAA
TTTGATGGTG AGGAAACGGA GTACCTGCGG CGTCAATCGG TCCTGCGGAC TGAAGTGCTG
CCCCATCTGG CCAATACGGT CATTCATGAA GCCAAAAGTT CGGGACTGTC TCCCCAGGAT
TTAGCAGATT TAGCCAGGGA GGAGGGGGAT TTACCAATTC TGGCGATCGC GGCGGGTCTG
TATCAGCGCT ACCAAACCCT GCTGCGGGAA CGGGATTTTA TTGATTACGA TGAAATGATT
CTGGCGGCCC TGCGGGTCTT AGAGCACGAA GCCCCCCTGA CCCAGTGGCA AAATCGCGTG
TTCGCTGTCT TTGAGGATGA GGCCCAGGAT TCCACTCCCC TGCAAACTCG TCTGCTGGAA
ATTCTGGCCA CCAATCCCGA TCGTCCTGAG CAGCCCAATC TAGTGCGTGT GGGAGACCCC
AATCAGGCGA TTAACTCCAC CTTTACCCCC GCCGATCCGT TCTTTTTCCG TGACTTTTGT
ACCCAGTGCC AGAGCCAGGG ACGGTTCTTT ACGATGGATC AGGCCGGGCG CAGTTCTGCC
ATCATTCTGG CGGCCGCTAA CTTTGTGCTG AACTGGGTGA ATCAATCAAA ACTGGCCGGC
GCAGAGCAAC CCTTTCGTCC CCAGGTGATT CAACCCGTAG CGGCAGGAGA TCCCCAGGGT
GATGCCAATC CTCCCCCCAC GGGTGCAGGG CTGGAAATTT ACACTCCCTC CGACATCTAT
CAAACCGTCA ACCTGATTGG ACAACGGGTG CAGGATCTAT TTACAGCCAA TCCCCAGGGG
CGGGCAGCGG TGCTGGTGCG GGAAAATAAA CAGGGCCGGT TTATTGCCGA TGTCCTCAGT
CAACCCCAGC GTTACGGGCT AACGGTCGAT CTGAAACAGG CCCAAATTGA AATCTATGAT
GTCGGTAGCC GCGATCGGCG CTCCCATGTC CCGGCGGAAA TGCTGGCCTT ACTGCAATTT
CTCGATCGCC CCCATTCCCC CGACTACCTC AAAACTGCCC TCACGGTTCT GGTGGAACGT
CAACTGATTC CAGCTCAGGA TCTGAATGCC CTGGTCAGCC AGCCGGAGCA ATTTCTCTAC
CCCACCCCCC TCGATCCCCC CCTAACTCCT CCCCAGCAGG CCGCGCGGCA ATTCTGCGTC
AAGCTGTTAC GGGCCCGAAT TGAACTGCCC CACGACCAAC TGATCACCTT TCTGGCCCTG
GCTTTGCAAT ACGAGCAGGC GGAACTGGCC ACTGCAGAAA AATTGTCCGA TCGCCTCAAC
CAGCAAACCA GGGGCCGTCA GTCTATGAGT GCCACCCTGC CGGTCCTGCA AGAGATTGTT
GGGTCAGAAC GGTTCGAGCC AGTAGAGGTG GAGGAAACAG AAACGCGATT TTTGCGGGCC
CGGCAGCTCA CGATCCTGAC CATGCACAAG GCCAAGGGCT TGGACTGGGA CTATGTGTTT
ATCCCTTTCC TGCATGAGCA AACCTTGCCC GGTCAACTGT GGATTCCAGC CCAGTCCCAA
TTTTTGGGAG ATTTTACCCT GGCAGAGGTA GCACGGGCCC AGATTCGTCA TCGCCTGCAT
CAGCAATCTC AGTCCGCACA TCAGCCCACC GGCCGATCAC CCCTGCCGGA TACGGCCACC
GCCTGGCAAC GGGCCGCTGA CTTAAAAATT GCAGAAGAAT TTCGGCTGCT CTACGTGGCC
ATGACCCGTC CCAAACGGTT ACTCTGGTTG TCTGCCGCCC GCCGCGCACC CTTCAGTTGG
GGCAATTTTG ACTGGCACCG GGGTGATCCT TTAGAGGACA AAAAACCCTG CCCCGTGTTC
GCTCCCCTGC GGAAAAAATT CCCTAGTAGT TATCGAGGTG AGGGAAGATG A
|
|---|
| Protein sequence | MTSTVISVAA AGLDTLRQTL RPGQRELADW QSGSLAISAV PGAGKSYGMA VAAAIAVAQN
QLGRNRQLLV VTFTRSAAAN IKSRIREHLR LLGLPQGGFA VFTLHGLALA IARQSQFSGL
DLEQATLISP YQGHRLIRTC VDQWIAAHPH LYRQLLEGRQ FDGEETEYLR RQSVLRTEVL
PHLANTVIHE AKSSGLSPQD LADLAREEGD LPILAIAAGL YQRYQTLLRE RDFIDYDEMI
LAALRVLEHE APLTQWQNRV FAVFEDEAQD STPLQTRLLE ILATNPDRPE QPNLVRVGDP
NQAINSTFTP ADPFFFRDFC TQCQSQGRFF TMDQAGRSSA IILAAANFVL NWVNQSKLAG
AEQPFRPQVI QPVAAGDPQG DANPPPTGAG LEIYTPSDIY QTVNLIGQRV QDLFTANPQG
RAAVLVRENK QGRFIADVLS QPQRYGLTVD LKQAQIEIYD VGSRDRRSHV PAEMLALLQF
LDRPHSPDYL KTALTVLVER QLIPAQDLNA LVSQPEQFLY PTPLDPPLTP PQQAARQFCV
KLLRARIELP HDQLITFLAL ALQYEQAELA TAEKLSDRLN QQTRGRQSMS ATLPVLQEIV
GSERFEPVEV EETETRFLRA RQLTILTMHK AKGLDWDYVF IPFLHEQTLP GQLWIPAQSQ
FLGDFTLAEV ARAQIRHRLH QQSQSAHQPT GRSPLPDTAT AWQRAADLKI AEEFRLLYVA
MTRPKRLLWL SAARRAPFSW GNFDWHRGDP LEDKKPCPVF APLRKKFPSS YRGEGR
|
|---|
| |