| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_4618 |
|---|
| Symbol | |
|---|
| ID | 7290571 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | - |
|---|
| Start bp | 4703454 |
|---|
| End bp | 4704305 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 643587588 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_002485287 |
|---|
| Protein GI | 220909976 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.424709 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAGACTT CAATTCAGTC CTCTCCCCCC CGATCCCGTG CCTGGCTGCG ATGGCTGGAC
TATGGTTTCT ATGTGCTGGT GGCGATTGCC CTGGGGGGCT TTCTCTACTA TCTCTACAGT
TCCCGCGTTC TCCTGATTCG CTATTTCCCC TTTCTGGTGC AGGCCACGGT CACAACCCTG
GGCATTTCGA TCACCAGTAT GGTGTTGGCT ATGGTTTTGG GGGGGATTGG AGCCTGGGGA
CGATTATCGA AATGGGCGCT GGTGCGCGGG GTGGCGATCG TCTATGTGGA AGTGGTTCGG
GGAACCCCCA CTTTGGTCCA GCTCCTGCTC TGGGGCTTTG GCATTGGTAC AGTCATGTCC
CAGCTTGGTT TTGACCCGCG TGCGTTGGCC TTTAACCTGC TCACTCCCCT GCAAAGTAAC
AGCCTGGTTT CTCCAGTGTT TAACTTTATC TTTTATGGAG TGCTGGGGCT GAGTTTTAAC
TATGGAGCCT ATCTAACGGA AGTTTTTCGG GCCGGCATCG AGTCCATTTC CAGAGGACAG
ACTGAAGCGG CGCTCAGTTT GGGGCTGGAT AGTGTGCAGA CCATGGGGCG GATTGTCTTG
CCCCAGGCGA TTCGACTCAC CATTCCTCCC TTTACCAATA ACTTTATTAC CCTGATTCAG
GACAGTGCCC TGCTTTCGAC GATCGGGGTG ACGGAATTGC AGCAGGTCAC CTCCAGTTTT
GCCTATCCCC TCACCAATCC CAACGACAAG CTGTTTGTTT TCATCCTGGG GGCATTGTTT
TACCTGGCCC TTTGCTATCC CCTCTCCCGC TTGGCCCGGT ATTTAGAGCG CAAGTTGGCG
AAGGGAGCAT AA
|
|---|
| Protein sequence | METSIQSSPP RSRAWLRWLD YGFYVLVAIA LGGFLYYLYS SRVLLIRYFP FLVQATVTTL
GISITSMVLA MVLGGIGAWG RLSKWALVRG VAIVYVEVVR GTPTLVQLLL WGFGIGTVMS
QLGFDPRALA FNLLTPLQSN SLVSPVFNFI FYGVLGLSFN YGAYLTEVFR AGIESISRGQ
TEAALSLGLD SVQTMGRIVL PQAIRLTIPP FTNNFITLIQ DSALLSTIGV TELQQVTSSF
AYPLTNPNDK LFVFILGALF YLALCYPLSR LARYLERKLA KGA
|
|---|
| |