| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_4516 |
|---|
| Symbol | |
|---|
| ID | 7290469 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | - |
|---|
| Start bp | 4592551 |
|---|
| End bp | 4593717 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 643587488 |
|---|
| Product | integrase family protein |
|---|
| Protein accession | YP_002485187 |
|---|
| Protein GI | 220909876 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000228037 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.358425 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAATCGG AGAAGAACCT GGATAGTCGT CTTGGGCAGG TCAACGATCG CTTGAAAGCG
GCCCGACTGG GGGTACAGAT TGAGCGACGG GGGGAAAAGT TGAGTTTACG GGGAACCCTA
CCGCCCAAAC CGGGAAGTGT GCGGCTGAGG GCCTATCAAC AACGGCTCAG TCTGGGCTTA
CCTGCAACGC TGGAAGGGTT GAAACAGGCG GAACAGCAGG CGAAGGTTGT CGCGGCTCAA
CTGATTCAGA AAAGCTTTGA CTGGCGACCC TATCTGCAAA CTTATCTGGG CAGTGGGCGG
ACGGAATTGA GTCTGGCAGA ACAGATCCAG GCATTTGAGG CCAATTTTTT CAGCCAGTTC
CAGACGGATC AGGGCCTCTC CAGTCGTAAA ACCACCTGGG AGAGTGCTTA TGCGCCTTAC
CTGCGGAAAT TAGCAGCGAT CGCCCAGTCT CAACCCCGCC TCAGTTTGGT GGAAGCACTC
TATGCTACGG TGCAGTCTAC CCGGCCCAAT TCCCGCAGTC GTCAGGCCTG TTGTACGGCC
CTGCAGGCCC TGGCCAGCTT TCTCGACCTG GAATTGCCCA CTGAACTCAA AGCCTACTGG
GGCAACTATA ATCCCAGCCG CACCCAGTCT CGCCATCTCC CCGCCGATGC AGAAATTGTG
GCGCTGTTTG AGCAAATCCC CAATCCTGCC TGGCAGTTTG TCTATGGGGT GATGGCCACC
TATGGACTCC GCAATCATGA AGTTTTTTTT ACGGATTATC AAAGTTTGCA ACAGGGCGAT
CGGGAAGCTA CGATTCGAGT CCTAGAAACC ACCAAAACGG GGGCTCACGA AGTCTGGCCG
TTTCATCCCG AATGGGTGGA GCAATTTAAC CTGCGTAATA TTTGTTTGCC TCCGGTTAAC
ACCAACCTTA ACTCCACAAC CCTGCAACGG ATTGGCCAGG CTGTAACCCG TCAGTTTCGC
CGCTATGGTT TACCCTTTTC TCCCTACGAT CTACGCCATG CCTGGGCGGT TCGGACGATT
CACTTTGGCC TGCCCGATAC AATTGCCGCT CAAATGATGG GGCACTCTGT CGCCGTGCAT
ACCCGTACCT ACCACCGCTG GCTCGCCCGA CGAGATCAAC AACAGGCGGT CACCGCTGCC
CTCAGCCGTC GTCAAACCCA GGGATAG
|
|---|
| Protein sequence | MKSEKNLDSR LGQVNDRLKA ARLGVQIERR GEKLSLRGTL PPKPGSVRLR AYQQRLSLGL
PATLEGLKQA EQQAKVVAAQ LIQKSFDWRP YLQTYLGSGR TELSLAEQIQ AFEANFFSQF
QTDQGLSSRK TTWESAYAPY LRKLAAIAQS QPRLSLVEAL YATVQSTRPN SRSRQACCTA
LQALASFLDL ELPTELKAYW GNYNPSRTQS RHLPADAEIV ALFEQIPNPA WQFVYGVMAT
YGLRNHEVFF TDYQSLQQGD REATIRVLET TKTGAHEVWP FHPEWVEQFN LRNICLPPVN
TNLNSTTLQR IGQAVTRQFR RYGLPFSPYD LRHAWAVRTI HFGLPDTIAA QMMGHSVAVH
TRTYHRWLAR RDQQQAVTAA LSRRQTQG
|
|---|
| |