Gene Cyan7425_4444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan7425_4444 
Symbol 
ID7290397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7425 
KingdomBacteria 
Replicon accessionNC_011884 
Strand
Start bp4520306 
End bp4521004 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content53% 
IMG OID643587416 
ProductTetratricopeptide TPR_2 repeat protein 
Protein accessionYP_002485115 
Protein GI220909804 
COG category[R] General function prediction only 
COG ID[COG4783] Putative Zn-dependent protease, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTTTA CATTGCAGTT CTGCACAGAC CAATCTCCCC AATTCCAGCA ACGGAACCCT 
TCCAGCCCAA TCGAGTCCTG GGGTACGATC AGGCTGAGGA GCTTTGAGTT TGCCCAACCC
TTATCGAAAT TAATTGCCCT TTCCTTCATG CGCTACATTG ACCGGAACGT CCCGATCGTC
GGCTTACTCC TGAGTGGCTT GCTGCTGATT TCCAGTCCGG CTCTAGCTGA AAACAATGAC
CTGTTTGAGC AGGCTCAGCA GGCCCAGGAA CAGGGAGACT ATCTTCAGGC AGAGCAACTC
TGGCAGCAAC TTTTGCGACA CCGCCCTGCT TCGGCTGAGA TTTACTACAA CCTGGGGGTC
AGTTTTCATC ACCAACTCAA GTTACCAGAA GCGATCGCTG CTTACCAGAA TGCAACCCGG
CTCGCTCCCG ATTACAGTGC TGCCTATCTC AACCTGGGTT TAGCCTGGAT TGAAACTGGG
GACTATAAGC AGGCCATGAC CACGTTTGAA CAGGTATTAG CCCTACCCGA TCAACCCTCC
AAACCGGTCA GCACCCATGC CCTCGCTTAC TATGACCTGG CCATTGTGCT GAAACGACAG
GGAAAAGCGG AGGCCGCACT GCAGCAAGTG CAACAATCCC TGACCCTGGC TCCAGGTTTT
CAGGCCGCCC AACAGCTACT CCAGCAACTG CAACCTTGA
 
Protein sequence
MIFTLQFCTD QSPQFQQRNP SSPIESWGTI RLRSFEFAQP LSKLIALSFM RYIDRNVPIV 
GLLLSGLLLI SSPALAENND LFEQAQQAQE QGDYLQAEQL WQQLLRHRPA SAEIYYNLGV
SFHHQLKLPE AIAAYQNATR LAPDYSAAYL NLGLAWIETG DYKQAMTTFE QVLALPDQPS
KPVSTHALAY YDLAIVLKRQ GKAEAALQQV QQSLTLAPGF QAAQQLLQQL QP