Gene Cyan7425_4342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan7425_4342 
SymbolnusB 
ID7290294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7425 
KingdomBacteria 
Replicon accessionNC_011884 
Strand
Start bp4415139 
End bp4415768 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content53% 
IMG OID643587313 
Producttranscription antitermination protein NusB 
Protein accessionYP_002485013 
Protein GI220909702 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACCCC GTCGTATTGC CCGTGAATTG GCCCTATTGG CCCTGAGTCA ACTGCCCCAG 
AAACCAGAAC GTCTCACGAC TCAGGATTTA CAAAGCGTTG TGGTGGCTGC CGTACGAACC
CTGGCTGGAG AAGCTCAAGA TGCCCTGGAA ACCGCAGCGA TGGAATTGAA ACGAGGTCGC
GATCGCCTCT TGGCCAGTGA AATTCAGGCG GTGGATGTGC AGAGTTCTCG GGCGATGGTA
ACGGAGGCGA TCACGCTGGC GGAAACGGCG GTTAATCGTC TGGGCATGGT GTTGGATCTA
CCGGAATTTG TGCAGTTAGC TAATCAACAG CAGGTGCGGG ACTTTAGCCT GGACATTCTC
AAGCAGGTAT TAACCCACCG CACAGCCATT GATCACCTTT TAGAAACTGC TCTGGTGGAT
TGGCAATTCA ACCGTTTAGC CCAGATCGAT CGCAACATTC TCCGTATTGC TGTAGCTGAA
ATTCTTTACC TGAAAACCCC CACTCAGGTC ACCATCAACG AAGCCGTAGA ACTGGCTAAG
CGTTATAGCG ACGAAGATGG CTATCGGTTT GTCAATGGGG TACTGCGCCG CACCATTCCA
CACCTGGAAG CACAGGCACA GGGAACCTGA
 
Protein sequence
MQPRRIAREL ALLALSQLPQ KPERLTTQDL QSVVVAAVRT LAGEAQDALE TAAMELKRGR 
DRLLASEIQA VDVQSSRAMV TEAITLAETA VNRLGMVLDL PEFVQLANQQ QVRDFSLDIL
KQVLTHRTAI DHLLETALVD WQFNRLAQID RNILRIAVAE ILYLKTPTQV TINEAVELAK
RYSDEDGYRF VNGVLRRTIP HLEAQAQGT