Gene Cyan7425_4275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan7425_4275 
Symbol 
ID7290226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7425 
KingdomBacteria 
Replicon accessionNC_011884 
Strand
Start bp4337721 
End bp4338635 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content52% 
IMG OID643587248 
ProductSubstrate-binding region of ABC-type glycine betaine transport system 
Protein accessionYP_002484949 
Protein GI220909638 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCAAGG GTTGGCGATT CAAACGATGG TGGATTTACC CCGTGCTGAT GATGACCCTG 
GTGGGTTGGA CGATCGCCTG CTCTGGCACT CCTGATCAAG CAACTATTCG AGTGGGATCT
AAAGATTTCA CCGAACAGCT GATCCTGGGG GAAATGTATG CTCAGGTATT GGAGCAGAGC
GGTTTGAAGG TCGAGCGAAA ACTCAATTTG GGCGGTACCC CTGTCGTTCA GGCCAGCTTG
TTGAATGGCG AAATTGATCT TTACCCGGAA TACACCGGCA CGGGTTTATT AACGGTCTTG
AAGTTACCGG CCCAACCCGA CCCCAAGACG GTTTATCAAA CCGTAGCTGC AGCTTATCAA
AAGCAGTTTA ATCTGATCTG GTTGCAGCCC GCCCCGATGA ACAATACCCA GGCCCTGGTC
ACCACCCCGG CGATCGCCCA GCAGTATGGC TTGAAAACGA TCGCGGATTT TGTCGCTAAA
GCCGATCAAC TGATTCTGGT TGGTCCCCCA GAGTTTGCTG TGCGGGAGGA TGGACTACCG
GGCATCAGGC GGGTGTATGG GGATTTCAAA CTTAAAAATT TTATTTCCAC TGATGCGGGT
CTGCGTTATC CAGCTCTGCA GTCTGGTCAA GCTAATGTAG CGGTGGGTTT CAGTACCGAT
GGTGAAATTG CCGCCGATCG CCTGGTCATT CTGGAGGACA ATAAAGGGCT GTTTCCCCCC
TATCAGGTCG CGCCGGTCGT GCGTCAGGCA ACTTTAAACG CCCATCCCCA GATTCAAACG
CAGCTCAACG CGATCGCCCC CCATCTGACT AATGCAACCA TGCAAAAGCT GAATGACGCA
GTGAGTGGAC AAAAACGGGA ACCAGCAGAT GTGGCCCGAG AATTCTTGAG TTCCATTAAT
CTGGTCAAAC CCTAA
 
Protein sequence
MSKGWRFKRW WIYPVLMMTL VGWTIACSGT PDQATIRVGS KDFTEQLILG EMYAQVLEQS 
GLKVERKLNL GGTPVVQASL LNGEIDLYPE YTGTGLLTVL KLPAQPDPKT VYQTVAAAYQ
KQFNLIWLQP APMNNTQALV TTPAIAQQYG LKTIADFVAK ADQLILVGPP EFAVREDGLP
GIRRVYGDFK LKNFISTDAG LRYPALQSGQ ANVAVGFSTD GEIAADRLVI LEDNKGLFPP
YQVAPVVRQA TLNAHPQIQT QLNAIAPHLT NATMQKLNDA VSGQKREPAD VAREFLSSIN
LVKP