Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan7425_4193 |
Symbol | lspA |
ID | 7290144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7425 |
Kingdom | Bacteria |
Replicon accession | NC_011884 |
Strand | + |
Start bp | 4246553 |
End bp | 4247074 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 643587166 |
Product | lipoprotein signal peptidase |
Protein accession | YP_002484867 |
Protein GI | 220909556 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0597] Lipoprotein signal peptidase |
TIGRFAM ID | [TIGR00077] lipoprotein signal peptidase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.568033 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTTCA AGAACACCTT CTTCTGGTTC ACTGCTCTAC TCAGCCTGCT ACTGGATCAC CTGACTAAAC TATGGGTGGT GAAGAACTTT GCCCTCACGG TTCCACCTCA GACAATTCCT CTCTGGCCGG GAGTTTTTCA CCTGACCTAT GTCACCAATA CCGGGGCAGC TTTCAGTTTA TTCAGTCAGG GGGGAGAGTG GTTACGCTGG CTCTCTCTGG GGGTAAGTGT GGGGTTAATG GCACTGGCAA TCCTGGGTCC CAACTTTAAC CGCTGGGAAC AGGCAGGCTA TGGTTTTCTC CTGGGTGGGG CGGCGGGTAA CGGCATCGAT CGTTTTGTGG CCGGCCGCGT GGTGGACTTC TTAGACTTTC GGTTGATCGG CTTTCCAATT TTTAATCTGG CTGATGTTTT TATTAATATC GGCATTATCT GTCTGCTGAT CGCAGCCTGG GGACCCCTTC CCTCCCGCCG CCGGGCAGAA CGAAGACCCT CCTCCCCACC CCCATCGGAC AAATTGCCCT AG
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Protein sequence | MNFKNTFFWF TALLSLLLDH LTKLWVVKNF ALTVPPQTIP LWPGVFHLTY VTNTGAAFSL FSQGGEWLRW LSLGVSVGLM ALAILGPNFN RWEQAGYGFL LGGAAGNGID RFVAGRVVDF LDFRLIGFPI FNLADVFINI GIICLLIAAW GPLPSRRRAE RRPSSPPPSD KLP
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