Gene Cyan7425_4176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan7425_4176 
Symbol 
ID7290127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7425 
KingdomBacteria 
Replicon accessionNC_011884 
Strand
Start bp4227930 
End bp4228661 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content57% 
IMG OID643587149 
Product16S ribosomal RNA methyltransferase RsmE 
Protein accessionYP_002484850 
Protein GI220909539 
COG category[S] Function unknown 
COG ID[COG1385] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR00046] RNA methyltransferase, RsmE family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCGAC TTCAACGGCT GGCGATCGCC TCCACCCAAC GGCAACAGCA ACAAATTTAC 
CTGACCCCCT CTCAGCACCA TTACCTGATT CAGGTTTTGC GCTTAACCGT GGGCGATCGG
TTTCTGGCCA TTCTGGAACC GGGGGAACGC TGGTTAGCTG AACTGTCCTC CAGTCAGGTT
GCCCTGCTAT TGGAAGAGGT CGAAGGCGAA ACTGAACTGG CGGTTCCTGT GACCCTGCTG
GCAGCACTCC CCAAGGGGCA GGGATTTGAT CAGGTGGTTT ACCAGGCCAC GGAGTTAGGG
GTGAGCCGGA TTATTCCACT GATCAGCGAT CGCACCCTAC TGCAACCGAG CGAGCAAAAA
CTGGAACGCT GGCGGCGGAT TGTACGGGAA GCCACAGAGC AATCGGGGCG GTTAGTTGTA
CCCAGGATTG ATCCACCCCT CCGGTTTAGC CCAGCCATCG CCGCTTTTAA CCCCGCCGAT
CAACAGCTTT ACTTCTGCAC CCCTGACCCG GCCGCTCCCC ATCTGGCGGA TTGTTTAGCT
GATGCTCCCT TCAACCCGAT CGCGATCATG ACTGGACCAG AAGGAGGATG GACTGAAACA
GAAATGACCC AGGCACAGGC AGCTGGTTTT CAATCCGTTA GTTTAGGTCA ACGAGTCTTA
CGGGCCGTTA CCGCACCGAT CGTCGCGCTG TCCCTAGTTG CAGCCCATCT AGAACAGCAA
GATCCCACCT AG
 
Protein sequence
MARLQRLAIA STQRQQQQIY LTPSQHHYLI QVLRLTVGDR FLAILEPGER WLAELSSSQV 
ALLLEEVEGE TELAVPVTLL AALPKGQGFD QVVYQATELG VSRIIPLISD RTLLQPSEQK
LERWRRIVRE ATEQSGRLVV PRIDPPLRFS PAIAAFNPAD QQLYFCTPDP AAPHLADCLA
DAPFNPIAIM TGPEGGWTET EMTQAQAAGF QSVSLGQRVL RAVTAPIVAL SLVAAHLEQQ
DPT