Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cyan7425_4176 |
Symbol | |
ID | 7290127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cyanothece sp. PCC 7425 |
Kingdom | Bacteria |
Replicon accession | NC_011884 |
Strand | + |
Start bp | 4227930 |
End bp | 4228661 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643587149 |
Product | 16S ribosomal RNA methyltransferase RsmE |
Protein accession | YP_002484850 |
Protein GI | 220909539 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCGAC TTCAACGGCT GGCGATCGCC TCCACCCAAC GGCAACAGCA ACAAATTTAC CTGACCCCCT CTCAGCACCA TTACCTGATT CAGGTTTTGC GCTTAACCGT GGGCGATCGG TTTCTGGCCA TTCTGGAACC GGGGGAACGC TGGTTAGCTG AACTGTCCTC CAGTCAGGTT GCCCTGCTAT TGGAAGAGGT CGAAGGCGAA ACTGAACTGG CGGTTCCTGT GACCCTGCTG GCAGCACTCC CCAAGGGGCA GGGATTTGAT CAGGTGGTTT ACCAGGCCAC GGAGTTAGGG GTGAGCCGGA TTATTCCACT GATCAGCGAT CGCACCCTAC TGCAACCGAG CGAGCAAAAA CTGGAACGCT GGCGGCGGAT TGTACGGGAA GCCACAGAGC AATCGGGGCG GTTAGTTGTA CCCAGGATTG ATCCACCCCT CCGGTTTAGC CCAGCCATCG CCGCTTTTAA CCCCGCCGAT CAACAGCTTT ACTTCTGCAC CCCTGACCCG GCCGCTCCCC ATCTGGCGGA TTGTTTAGCT GATGCTCCCT TCAACCCGAT CGCGATCATG ACTGGACCAG AAGGAGGATG GACTGAAACA GAAATGACCC AGGCACAGGC AGCTGGTTTT CAATCCGTTA GTTTAGGTCA ACGAGTCTTA CGGGCCGTTA CCGCACCGAT CGTCGCGCTG TCCCTAGTTG CAGCCCATCT AGAACAGCAA GATCCCACCT AG
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Protein sequence | MARLQRLAIA STQRQQQQIY LTPSQHHYLI QVLRLTVGDR FLAILEPGER WLAELSSSQV ALLLEEVEGE TELAVPVTLL AALPKGQGFD QVVYQATELG VSRIIPLISD RTLLQPSEQK LERWRRIVRE ATEQSGRLVV PRIDPPLRFS PAIAAFNPAD QQLYFCTPDP AAPHLADCLA DAPFNPIAIM TGPEGGWTET EMTQAQAAGF QSVSLGQRVL RAVTAPIVAL SLVAAHLEQQ DPT
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