Gene Cyan7425_4162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan7425_4162 
Symbol 
ID7290113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7425 
KingdomBacteria 
Replicon accessionNC_011884 
Strand
Start bp4219443 
End bp4220228 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content57% 
IMG OID643587135 
Product3-methyl-2-oxobutanoate hydroxymethyltransferase 
Protein accessionYP_002484836 
Protein GI220909525 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0413] Ketopantoate hydroxymethyltransferase 
TIGRFAM ID[TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.43821 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGGTTA CGATTCCCCA GTTACAGCAA TGGAAACGAT CGGGACGGGC GATCGCAGTC 
CTGACAGCCT GGGATTGGCT ATGGGCCTCT CTGCTGGATC AGGCGGGGGT TGATCTGATC
CTGGTGGGCG ATTCCCTGGC CATGGTGGCG TTGGGCCACA AAAATACTCT CCCCCTCAGC
CTGGACGAAA TGCTTCACCA TACACGGGCG GTGTGTCGGG GGGTGCAGCG GGCCCTGGTG
GTCTGTGATT TGCCCTTTGG CAGCTATCAG GAAAGCCCTC AGCAGGCGGT GCGATCGGCC
AGTCGGGTGC TGAAGGAAAC CCCTGCCCAG GCGGTCAAAC TGGAGGGCGG CTACCCGGCC
ATGGTGGAAA CCGTTACCCA TCTGGTGCGG GCGGGCATTC CGGTGCTGGG CCACGTTGGA
CTCACCCCCC AATCGGTGCA TCAGTACGGT GGTTATCCCC AGCAGGGTAA GTCAGTGGAG
GCGGCAGAAC GGATTTTGTC TGAGGCGATC GCCCTGGAGC AGGCTGGAGC TTTTGCAATC
ATTCTGGAAC ACATTCCGGC AGACCTGGGT TTAACGATTA CACAGAAATT GTCCATTCCG
ACGATCGGGA TTGGTGCGGG CCCCCATTGT GATGGCCAGG TGTTGGTTAC TGCAGATGCC
CTGGGTTTAT CAGAACGGCA ACCTCCCTTT GCAAAGGCTT ATGCCAATTT AAGAGAAACT
ATTTTGCAAG CGGTTCAGGA ATACTGCAAC GAAGTTCAAA CTCATCAGTT CCCAGGCAGT
GGTTAA
 
Protein sequence
MVVTIPQLQQ WKRSGRAIAV LTAWDWLWAS LLDQAGVDLI LVGDSLAMVA LGHKNTLPLS 
LDEMLHHTRA VCRGVQRALV VCDLPFGSYQ ESPQQAVRSA SRVLKETPAQ AVKLEGGYPA
MVETVTHLVR AGIPVLGHVG LTPQSVHQYG GYPQQGKSVE AAERILSEAI ALEQAGAFAI
ILEHIPADLG LTITQKLSIP TIGIGAGPHC DGQVLVTADA LGLSERQPPF AKAYANLRET
ILQAVQEYCN EVQTHQFPGS G