| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cyan7425_4135 |
|---|
| Symbol | |
|---|
| ID | 7290086 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Cyanothece sp. PCC 7425 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011884 |
|---|
| Strand | - |
|---|
| Start bp | 4184250 |
|---|
| End bp | 4184687 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 643587109 |
|---|
| Product | transcriptional regulator, BadM/Rrf2 family |
|---|
| Protein accession | YP_002484810 |
|---|
| Protein GI | 220909499 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1959] Predicted transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.255829 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTAA CCACCCGTGG ACACTACAGT GTTAAAGCCC TGCTGGATTT GAGTTTGCAA
CCCAACTATG GGCCAACTTC AGTGCAGGCG ATCGCCCAGC GCCAGGATCT TCCTGCTCCC
TACCTGGAAA AATTGCTGAT TGCGATGCGG CGGGCCGGTT TAGTCCACTC ACTGCGGGGG
GCCCAGGGCG GCTATCAACT GGCCCGATCC CCAGCCCAGA TTTCCCTCGC ACAAATCCTG
GAAGCCGTGG GAGAATCGAT CGAGCCCCTG TTTGCCCAAC GGGCCGCTCA GTCCGGGGAT
TGGCTCACCC TTACCCTTTG GAAACGCTTA CAGCAAAAAC TGAGAGAATC CCTTTACACG
ATTACACTGG AAGATCTCTA CTACGATGCC CGCAGTTGGC AAGCTGCCCA GGGGGAAGAT
ACTAATTTTA TTGTTTAA
|
|---|
| Protein sequence | MKLTTRGHYS VKALLDLSLQ PNYGPTSVQA IAQRQDLPAP YLEKLLIAMR RAGLVHSLRG
AQGGYQLARS PAQISLAQIL EAVGESIEPL FAQRAAQSGD WLTLTLWKRL QQKLRESLYT
ITLEDLYYDA RSWQAAQGED TNFIV
|
|---|
| |