Gene Cyan7425_4090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan7425_4090 
Symbol 
ID7290039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7425 
KingdomBacteria 
Replicon accessionNC_011884 
Strand
Start bp4125390 
End bp4126040 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content54% 
IMG OID643587063 
ProductCRISPR-associated protein Cas5 family 
Protein accessionYP_002484765 
Protein GI220909454 
COG category 
COG ID 
TIGRFAM ID[TIGR01868] CRISPR system CASCADE complex protein CasD/Cas5e
[TIGR02593] CRISPR-associated protein Cas5, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.509678 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACCC TACTCTTACG AATGCGGGCA CCGATGATGA GTTGGGGCGA TCACAGCCGC 
TTTACCATTC GGGATAGCCG CCGCGAACCG ACGAAATCTG CGGTAATCGG CTTACTCTGC
GCGGCCCTGG GTCGTCCTCG CTGGGAAGCT GTCGCCGATC TGACTGCCCT GAAAATGGGA
GTTCGGATTA ACCAGGAAGG GCTGGTGCAG TGTGACTACC ACACGGTACA AGATAGCATC
AAGTCCAGTG GGAGTAAGGG CAATACGGTA ATTAGCCACC GGTATTACAT TGCGGATGCT
GATTACCTAG TGGGGTTAGA GGGGAGCGAT CGCCACTTCC TGGAAAGCCT CGATTCCGCC
CTCCAATCCC CTATCTGGCA AGTTTATTTT GGACGCAAAA GCTTTGTGCC AAGCTGCCCG
GTTGCGCTCC ATGTGAGTGA TCAACCCCTA GCCGAAGCTT TAAAGCACCG CATCACCCTC
AGCAAAACAA TGGCTCACAA ACTACCCAAC CGATTGCGAT GTGTGCTTGA AGTGCCCGAT
AGCCTGGATG TCCGGCAGGA CGTTCCGCTC GATTGGCAAA AGCGTCACTT TGGCAGCCGT
TGCGTTGACA CCGAGTATTT GGAGAAAGAG CAATGTATCT CTCAAAGTTA G
 
Protein sequence
MPTLLLRMRA PMMSWGDHSR FTIRDSRREP TKSAVIGLLC AALGRPRWEA VADLTALKMG 
VRINQEGLVQ CDYHTVQDSI KSSGSKGNTV ISHRYYIADA DYLVGLEGSD RHFLESLDSA
LQSPIWQVYF GRKSFVPSCP VALHVSDQPL AEALKHRITL SKTMAHKLPN RLRCVLEVPD
SLDVRQDVPL DWQKRHFGSR CVDTEYLEKE QCISQS