Gene Cyan7425_4089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCyan7425_4089 
Symbol 
ID7290038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCyanothece sp. PCC 7425 
KingdomBacteria 
Replicon accessionNC_011884 
Strand
Start bp4124788 
End bp4125408 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content48% 
IMG OID643587062 
ProductCRISPR-associated protein, Cse3 family 
Protein accessionYP_002484764 
Protein GI220909453 
COG category 
COG ID 
TIGRFAM ID[TIGR01907] CRISPR system CASCADE complex protein CasE/Cse3 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.208178 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCTCT CAAAGTTAGT TCTAAATGAA CGCGATCGCA CCGTTCAGCG GGATCTCAGC 
AACGTCCATG CCCTACATCA GCGGATCATG CAAGCCTTTC CTGACGAACA GCGAGAAAAT
CCTCGTGCTG ACTGGAATGT ATTATTTCGG CAGGAGCCGG ACATCAGCAT TGTCTTAGTT
CAATCGGAAA TTGAACCCAA TTGGACACAT TTATCCTACA ACTACCTGCT CCAGCCACCC
CAGCTCACAT CCGTTAATTT TGTGACCAGT CGTTTAGAAC CGGGACGAGC ATTTCAATTT
CGCTTGAAAG CTAATCCCAG CAAACGCGAT AAACAAAGTC GCAAACTCAT TGGCATGTTT
CATCAGGCAG ATCAGATTGC ATGGCTGGAA CGGCAAGCAG AGCAGCGTGG CTTTAAGCTG
CTAGGGGTAG ATGTGATTCC CACCCCCAAT GTGTTTGGAA TGAAAGAAAA AGGCAAGCCA
CCGATCCAAA TTCTCACTGT GATGTATCAA GGCATCTTAC AAATAACTGA TTCTGCCCCA
TTCATCAACG CTATACAACA AGGGATTGGG CGGGGGCGTT CCTACGGTTG TGGTCTGCTG
TCGATCGCCA GAGTCAACTA A
 
Protein sequence
MYLSKLVLNE RDRTVQRDLS NVHALHQRIM QAFPDEQREN PRADWNVLFR QEPDISIVLV 
QSEIEPNWTH LSYNYLLQPP QLTSVNFVTS RLEPGRAFQF RLKANPSKRD KQSRKLIGMF
HQADQIAWLE RQAEQRGFKL LGVDVIPTPN VFGMKEKGKP PIQILTVMYQ GILQITDSAP
FINAIQQGIG RGRSYGCGLL SIARVN